RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 HOXC12P31275 282 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 SH3BGRP55822 239 aaPredicted RBP10.93□□□□□ -0.66
HMG20B-211ENST00000486028 BIDP55957 195 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 PRPS1P60891 318 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 VLDLRP98155 873 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 PRKCDQ05655 676 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 DGCR6Q14129 220 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 TRIM25Q14258 630 aaKnown RBP10.93□□□□□ -0.66
HMG20B-211ENST00000486028 KLHL17Q6TDP4 642 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 KLHL24Q6TFL4 600 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 MBOAT2Q6ZWT7 520 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 SLC35D2Q76EJ3 337 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 NRMQ8IXM6 262 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 OR6N1Q8NGY5 312 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 OR52N5Q8NH56 324 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 OR6X1Q8NH79 312 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 NINJ1Q92982 152 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 POP5Q969H6 163 aaKnown RBP10.93□□□□□ -0.66
HMG20B-211ENST00000486028 UTP4Q969X6 686 aaKnown RBP10.93□□□□□ -0.66
HMG20B-211ENST00000486028 BOD1Q96IK1 185 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 ADAD1Q96M93 576 aaKnown RBP10.93□□□□□ -0.66
HMG20B-211ENST00000486028 ALKBH3Q96Q83 286 aaPredicted RBP10.93□□□□□ -0.66
HMG20B-211ENST00000486028 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 PIP5K1AQ99755 562 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 RNPEPL1Q9HAU8 725 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 GPR35Q9HC97 309 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 SLC17A5Q9NRA2 495 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 MED29Q9NX70 200 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 ST6GALNAC2Q9UJ37 374 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 AMDHD2Q9Y303 409 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 SLC25A15Q9Y619 301 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 MYO9AB2RTY4 2548 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 A0A087WUU8 490 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 A0A1W2PPR1 153 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 A0A1W2PRG6 482 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 EFCAB9A8MZ26 197 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 M0R3G1 203 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 GYG2O15488 501 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 PIP5K1CO60331 668 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 PDE5AO76074 875 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 STAMBPO95630 424 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 BCL10O95999 233 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 WNT11O96014 354 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 CD3EP07766 207 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 SAGP10523 405 aaPredicted RBP10.92□□□□□ -0.66
HMG20B-211ENST00000486028 FUT4P22083 530 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 CALRP27797 417 aaKnown RBP10.92□□□□□ -0.66
HMG20B-211ENST00000486028 AQP2P41181 271 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 ARF1P84077 181 aaKnown RBP10.92□□□□□ -0.66
HMG20B-211ENST00000486028 RPL18Q07020 188 aaKnown RBP10.92□□□□□ -0.66
HMG20B-211ENST00000486028 CAMK2DQ13557 499 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 LAPTM4AQ15012 233 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 TAF11Q15544 211 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 MTX3Q5HYI7 312 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 FGD3Q5JSP0 725 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 NCMAPQ5T1S8 102 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 ANKRD16Q6P6B7 361 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 PODNL1Q6PEZ8 512 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 CYP2R1Q6VVX0 501 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 LINGO2Q7L985 606 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 DHFR2Q86XF0 187 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 WDR31Q8NA23 367 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 OR1K1Q8NGR3 316 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 BCL2L2Q92843 193 aaPredicted RBP10.92□□□□□ -0.66
HMG20B-211ENST00000486028 ZNF347Q96SE7 839 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 TMEM204Q9BSN7 226 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 THTPAQ9BU02 230 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 LIME1Q9H400 295 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 CRLF2Q9HC73 371 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 IL1RAPQ9NPH3 570 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 OBP2BQ9NPH6 170 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 INIPQ9NRY2 104 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 TMEM5Q9Y2B1 443 aa10.92□□□□□ -0.66
HMG20B-211ENST00000486028 MAGED1Q9Y5V3 778 aaPredicted RBP10.92□□□□□ -0.66
HMG20B-211ENST00000486028 A0A1W2PR80 420 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 DPRXA6NFQ7 191 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 DIRAS1O95057 198 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 RAF1P04049 648 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 SEMG1P04279 462 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 F13BP05160 661 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 FABP3P05413 133 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 TSPAN19P0C672 248 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 MAKP20794 623 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 CSNK1A1P48729 337 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 DAP3P51398 398 aaKnown RBP10.91□□□□□ -0.66
HMG20B-211ENST00000486028 ZNF83P51522 516 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 UBE2NP61088 152 aaKnown RBP10.91□□□□□ -0.66
HMG20B-211ENST00000486028 LSM11P83369 360 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMG20B-211ENST00000486028 BSPH1Q075Z2 132 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 KEAP1Q14145 624 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 ACKR1Q16570 336 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 CEACAM16Q2WEN9 425 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 ANKDD1AQ495B1 522 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 IQCCQ4KMZ1 466 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 DNAL1Q4LDG9 190 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 HIKESHIQ53FT3 197 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 TBPL2Q6SJ96 375 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 SEZ6L2Q6UXD5 910 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 TMEM108Q6UXF1 575 aa10.91□□□□□ -0.66
HMG20B-211ENST00000486028 PAMR1Q6UXH9 720 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms