RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 ATP1B1P05026 303 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 S100A6P06703 90 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 IL3P08700 152 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 RFPL3SP0C7P2 107 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 ARAFP10398 606 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 PRF1P14222 555 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 S1PR1P21453 382 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 EVX1P49640 407 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 MAN2A2P49641 1150 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 BLVRAP53004 296 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 ATP12AP54707 1039 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 WNT4P56705 351 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 NRG3P56975 720 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 RAE1P78406 368 aaKnown RBP9.71□□□□□ -0.85
DDX56-212ENST00000485367 CDK6Q00534 326 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 DUSP2Q05923 314 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 MGAT2Q10469 447 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 MAP4K2Q12851 820 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 NNATQ16517 81 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 HYAL4Q2M3T9 481 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 PRICKLE4Q2TBC4 344 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 GXYLT1Q4G148 440 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 KLHL12Q53G59 568 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 TMEM211Q6ICI0 200 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 ZNF585AQ6P3V2 769 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 SAMD14Q8IZD0 417 aaPredicted RBP9.71□□□□□ -0.85
DDX56-212ENST00000485367 LINC00471Q8N535 108 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 SLC37A3Q8NCC5 494 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 CA5BP1Q8WTZ4 195 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 ACOT12Q8WYK0 555 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 ADIPOR1Q96A54 375 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 EXOSC8Q96B26 276 aaKnown RBP9.71□□□□□ -0.85
DDX56-212ENST00000485367 UPRTQ96BW1 309 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 CNRIP1Q96F85 164 aaPredicted RBP9.71□□□□□ -0.85
DDX56-212ENST00000485367 RADILQ96JH8 1075 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 SECISBP2Q96T21 854 aaKnown RBP9.71□□□□□ -0.85
DDX56-212ENST00000485367 POLDIP3Q9BY77 421 aaKnown RBP9.71□□□□□ -0.85
DDX56-212ENST00000485367 PROK2Q9HC23 129 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 RYDENQ9NUL5 291 aaKnown RBP9.71□□□□□ -0.85
DDX56-212ENST00000485367 SLC23A1Q9UHI7 598 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 DTX4Q9Y2E6 619 aa9.71□□□□□ -0.85
DDX56-212ENST00000485367 PHF3Q92576 2039 aaKnown RBP9.71□□□□□ -0.86
DDX56-212ENST00000485367 EXPH5Q8NEV8 1989 aa9.71□□□□□ -0.86
DDX56-212ENST00000485367 TRDV1A0A1B0GX56 115 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 OR14I1A6ND48 311 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 C19orf84I3L1E1 186 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 SULT1B1O43704 296 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 PRKYO43930 277 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 OPN1SWP03999 348 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 POU2F1P14859 743 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 GALP22466 123 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 OR1E2P47887 323 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 MXD1Q05195 221 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 DUSP8Q13202 625 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 LTB4RQ15722 352 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 TRMT12Q53H54 448 aaKnown RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 C22orf42Q6IC83 251 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 CNIH2Q6PI25 160 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 TMEM107Q6UX40 140 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 CD300LDQ6UXZ3 194 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 CDH24Q86UP0 819 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 CCDC116Q8IYX3 515 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 LRRC25Q8N386 305 aaPredicted RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 RPRMLQ8N4K4 120 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 LRRC17Q8N6Y2 441 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 CDC26Q8NHZ8 85 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 C16orf78Q8WTQ4 265 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 UFD1Q92890 307 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 ZNF681Q96N22 645 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 IL4I1Q96RQ9 567 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 PRRG3Q9BZD7 231 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 NXF5Q9H1B4 397 aaKnown RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 FGF20Q9NP95 211 aaPredicted RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 NLKQ9UBE8 527 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 B4GALT7Q9UBV7 327 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 TESQ9UGI8 421 aaKnown RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 ACAD8Q9UKU7 415 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 SF3B6Q9Y3B4 125 aaKnown RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 ZNF175Q9Y473 711 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 APCP25054 2843 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 TRGV5A0A0B4J1U4 118 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 A0A1B0GVC2 190 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 LRRC3CA6NJW4 275 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 AQP7O14520 342 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 SUSD5O60279 629 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 SERPINI2O75830 405 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 SNAPC5O75971 98 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 DHFRP00374 187 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 IFNA7P01567 189 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 RAF1P04049 648 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 ANXA4P09525 319 aaPredicted RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 ETFAP13804 333 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 DRD2P14416 443 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 ATF4P18848 351 aaPredicted RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 TNFRSF1BP20333 461 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 APEX1P27695 318 aaKnown RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 POU1F1P28069 291 aa9.7□□□□□ -0.86
DDX56-212ENST00000485367 TIA1P31483 386 aaKnown RBP eCLIP9.7□□□□□ -0.86
DDX56-212ENST00000485367 SNRPD2P62316 118 aaKnown RBP9.7□□□□□ -0.86
DDX56-212ENST00000485367 PMPCAQ10713 525 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms