RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 UGT1A7Q9HAW7 530 aa2.31□□□□□ -2.04
CCDC66-219ENST00000484441 UGT1A10Q9HAW8 530 aa2.31□□□□□ -2.04
CCDC66-219ENST00000484441 UGT1A8Q9HAW9 530 aa2.31□□□□□ -2.04
CCDC66-219ENST00000484441 RAB18Q9NP72 206 aa2.31□□□□□ -2.04
CCDC66-219ENST00000484441 MMP17Q9ULZ9 603 aa2.31□□□□□ -2.04
CCDC66-219ENST00000484441 KIF3AQ9Y496 699 aa2.31□□□□□ -2.04
CCDC66-219ENST00000484441 PNPLA6Q8IY17 1366 aa2.31□□□□□ -2.04
CCDC66-219ENST00000484441 RGSL1A5PLK6 1076 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 DIRAS1O95057 198 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 CHI3L1P36222 383 aaPredicted RBP2.3□□□□□ -2.04
CCDC66-219ENST00000484441 OPRD1P41143 372 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 NCBP2P52298 156 aaKnown RBP eCLIP2.3□□□□□ -2.04
CCDC66-219ENST00000484441 ESRRGP62508 458 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 SLC7A9P82251 487 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 SYCNQ0VAF6 134 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 SLC36A3Q495N2 470 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 DUX4L9Q6RFH8 374 aaPredicted RBP2.3□□□□□ -2.04
CCDC66-219ENST00000484441 BHLHA15Q7RTS1 189 aaPredicted RBP2.3□□□□□ -2.04
CCDC66-219ENST00000484441 WDR86Q86TI4 376 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 PLA2G4DQ86XP0 818 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 PDXPQ96GD0 296 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 SECISBP2Q96T21 854 aaKnown RBP2.3□□□□□ -2.04
CCDC66-219ENST00000484441 THUMPD2Q9BTF0 503 aaKnown RBP2.3□□□□□ -2.04
CCDC66-219ENST00000484441 EXD2Q9NVH0 621 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 SMOXQ9NWM0 555 aa2.3□□□□□ -2.04
CCDC66-219ENST00000484441 PACSIN2Q9UNF0 486 aaPredicted RBP2.3□□□□□ -2.04
CCDC66-219ENST00000484441 IGLV3-22A0A075B6J6 115 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 TBX19O60806 448 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 CBX1P83916 185 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 KLHL30Q0D2K2 578 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 ZBED5Q49AG3 693 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 LINC00173Q6ZV60 143 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 BIVMQ86UB2 503 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 TMEM123Q8N131 208 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 MAIP1Q8WWC4 291 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 CLCC1Q96S66 551 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 YY1AP1Q9H869 796 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 ZNRD1Q9P1U0 126 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 RNF14Q9UBS8 474 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 LAMP5Q9UJQ1 280 aa2.29□□□□□ -2.04
CCDC66-219ENST00000484441 CEMIPQ8WUJ3 1361 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 IGKV1D-13A0A0B4J2D9 117 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 IGHV5-10-1A0A0J9YXX1 117 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 A0A1W2PP18 115 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 ZNF233A6NK53 670 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 OR5B21A6NL26 309 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 XPO1O14980 1071 aaKnown RBP2.28□□□□□ -2.04
CCDC66-219ENST00000484441 IDH1O75874 414 aaKnown RBP2.28□□□□□ -2.04
CCDC66-219ENST00000484441 VAMP5O95183 116 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 ADRA2AP08913 450 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 LINC00869P0C866 280 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 UBTFL1P0CB47 393 aaPredicted RBP2.28□□□□□ -2.04
CCDC66-219ENST00000484441 IGHV1-8P0DP01 117 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 IGKV1-13P0DP09 117 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 GNA11P29992 359 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 GPR6P46095 362 aaPredicted RBP2.28□□□□□ -2.04
CCDC66-219ENST00000484441 AQP6Q13520 282 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 CDC37Q16543 378 aaPredicted RBP2.28□□□□□ -2.04
CCDC66-219ENST00000484441 SFT2D3Q587I9 215 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 TMEM225Q6GV28 225 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 NTM-AS1Q6ZSK4 140 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 UTS2BQ765I0 119 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 STRADAQ7RTN6 431 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 SENP8Q96LD8 212 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 FAIM2Q9BWQ8 316 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 GABARAPL3Q9BY60 117 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 TMEM14AQ9Y6G1 99 aa2.28□□□□□ -2.04
CCDC66-219ENST00000484441 A0A1B0GVI7 797 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 RRP8O43159 456 aaKnown RBP2.27□□□□□ -2.05
CCDC66-219ENST00000484441 RBFOX2O43251 390 aaKnown RBP eCLIP2.27□□□□□ -2.05
CCDC66-219ENST00000484441 MED7O43513 233 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 ZNF207O43670 478 aaKnown RBP2.27□□□□□ -2.05
CCDC66-219ENST00000484441 POLR2MP0CAP2 368 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 CCDC130P13994 396 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 HMGB2P26583 209 aaKnown RBP2.27□□□□□ -2.05
CCDC66-219ENST00000484441 SOX6P35712 828 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 DUSP3P51452 185 aaPredicted RBP2.27□□□□□ -2.05
CCDC66-219ENST00000484441 PLD1Q13393 1074 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 IGFBP7Q16270 282 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 PDK4Q16654 411 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 DGUOKQ16854 277 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 TPD52L1Q16890 204 aaPredicted RBP2.27□□□□□ -2.05
CCDC66-219ENST00000484441 DMRTC1Q5HYR2 192 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 MMAAQ8IVH4 418 aaKnown RBP2.27□□□□□ -2.05
CCDC66-219ENST00000484441 MRPL47Q9HD33 250 aaKnown RBP2.27□□□□□ -2.05
CCDC66-219ENST00000484441 KCNIP3Q9Y2W7 256 aa2.27□□□□□ -2.05
CCDC66-219ENST00000484441 PTPRTO14522 1441 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 SHANK1Q9Y566 2161 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 RPAP1Q9BWH6 1393 aaPredicted RBP2.26□□□□□ -2.05
CCDC66-219ENST00000484441 IGLV3-12A0A075B6K2 115 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 POLR2DO15514 142 aaKnown RBP2.26□□□□□ -2.05
CCDC66-219ENST00000484441 HSMCR30P0CW71 290 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 FOLR1P15328 257 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 TCN1P20061 433 aaPredicted RBP2.26□□□□□ -2.05
CCDC66-219ENST00000484441 CCR8P51685 355 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 SUB1P53999 127 aaKnown RBP eCLIP2.26□□□□□ -2.05
CCDC66-219ENST00000484441 RPS21P63220 83 aaKnown RBP2.26□□□□□ -2.05
CCDC66-219ENST00000484441 LOXL1Q08397 574 aaPredicted RBP2.26□□□□□ -2.05
CCDC66-219ENST00000484441 FILIP1LQ4L180 1135 aa2.26□□□□□ -2.05
CCDC66-219ENST00000484441 ZNF684Q5T5D7 378 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms