RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 SNX18Q96RF0 628 aa9.03□□□□□ -0.96
HDAC6-226ENST00000483656 UCN2Q96RP3 112 aa9.03□□□□□ -0.96
HDAC6-226ENST00000483656 ACKR4Q9NPB9 350 aa9.03□□□□□ -0.96
HDAC6-226ENST00000483656 QPCTLQ9NXS2 382 aa9.03□□□□□ -0.96
HDAC6-226ENST00000483656 HAO2Q9NYQ3 351 aa9.03□□□□□ -0.96
HDAC6-226ENST00000483656 VSX1Q9NZR4 365 aaPredicted RBP9.03□□□□□ -0.96
HDAC6-226ENST00000483656 KLHL13Q9P2N7 655 aa9.03□□□□□ -0.96
HDAC6-226ENST00000483656 LSM2Q9Y333 95 aaKnown RBP9.03□□□□□ -0.96
HDAC6-226ENST00000483656 PCDHGA9Q9Y5G4 932 aaKnown RBP9.03□□□□□ -0.96
HDAC6-226ENST00000483656 LIPGQ9Y5X9 500 aa9.03□□□□□ -0.96
HDAC6-226ENST00000483656 CEPT1Q9Y6K0 416 aa9.03□□□□□ -0.96
HDAC6-226ENST00000483656 MAST4O15021 2626 aa9.02□□□□□ -0.96
HDAC6-226ENST00000483656 ALPK2Q86TB3 2170 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 IGHV3-15A0A0B4J1V0 119 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 A0A1W2PRG6 482 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 PRSS37A4D1T9 235 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 SLC22A31A6NKX4 558 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 GJE1A6NN92 205 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 LINC01387J3KSC0 135 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 EIF1AYO14602 144 aaKnown RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 SMAD9O15198 467 aaKnown RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 CXCL13O43927 109 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 WISP2O76076 250 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 RAB36O95755 333 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 IGHA1P01876 353 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 LIMS3P0CW19 117 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 LIMS4P0CW20 117 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 POU3F2P20265 443 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 PAICSP22234 425 aaKnown RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 ENPP1P22413 925 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 DCKP27707 260 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 PYCR1P32322 319 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 CD79BP40259 229 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 ETV1P50549 477 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 CLDN18P56856 261 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 RAC3P60763 192 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 POU3F1Q03052 451 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 GGTLC2Q14390 218 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 SLC10A1Q14973 349 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 TBR1Q16650 682 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 SYT6Q5T7P8 510 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 HBMQ6B0K9 141 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 LYPD4Q6UWN0 246 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 ESPNLQ6ZVH7 1005 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 ASB18Q6ZVZ8 466 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 SLC22A16Q86VW1 577 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 PM20D2Q8IYS1 436 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 OR6V1Q8N148 313 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 FAM109AQ8N4B1 249 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 NANOGP1Q8N7R0 232 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 OR2V1Q8NHB1 315 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 C9orf43Q8TAL5 461 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 SMAP2Q8WU79 429 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 ZMYND19Q96E35 227 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 DTNBP1Q96EV8 351 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 OXGR1Q96P68 337 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 DCBLD2Q96PD2 775 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 OR5M11Q96RB7 305 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 TIMP4Q99727 224 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 TUBA1CQ9BQE3 449 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 JAM3Q9BX67 310 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 DEFB127Q9H1M4 99 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 TSPAN10Q9H1Z9 355 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 ZDHHC11Q9H8X9 412 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 ADGRL4Q9HBW9 690 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 RPRD1BQ9NQG5 326 aaKnown RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 MED29Q9NX70 200 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 RAXQ9Y2V3 346 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 NOX1Q9Y5S8 564 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 DMXL2Q8TDJ6 3036 aa9.02□□□□□ -0.97
HDAC6-226ENST00000483656 TNRC6AQ8NDV7 1962 aaKnown RBP9.02□□□□□ -0.97
HDAC6-226ENST00000483656 SMIM31A0A1B0GVY4 71 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 IRGMA1A4Y4 181 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 SLC22A23A1A5C7 686 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 FAM171A2A8MVW0 826 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 NPIPA5E9PKD4 350 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 M0R3G1 203 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 TAF4O00268 1085 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 SEC14L5O43304 696 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 DNPH1O43598 174 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 EIF1BO60739 113 aaKnown RBP9.01□□□□□ -0.97
HDAC6-226ENST00000483656 TRMUO75648 421 aaKnown RBP9.01□□□□□ -0.97
HDAC6-226ENST00000483656 GLCEO94923 617 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 BCL10O95999 233 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 RENP00797 406 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 TFP02787 698 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 SBK2P0C263 348 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 ZNF708P17019 499 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 CARD18P57730 90 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 RPS7P62081 194 aaKnown RBP9.01□□□□□ -0.97
HDAC6-226ENST00000483656 CSNK2A1P68400 391 aaPredicted RBP9.01□□□□□ -0.97
HDAC6-226ENST00000483656 SLC35D3Q5M8T2 416 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 EEF1A1P5Q5VTE0 462 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 TMEM225Q6GV28 225 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 BORAQ6PGQ7 559 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 Q6ZS92 163 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 GPR141Q7Z602 305 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 ADCK1Q86TW2 530 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 UEVLDQ8IX04 471 aa9.01□□□□□ -0.97
HDAC6-226ENST00000483656 UBQLNLQ8IYU4 475 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms