RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 NUDT6P53370 316 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 GABARAPL2P60520 117 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 SLC35A2P78381 396 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 SRYQ05066 204 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 ZNF91Q05481 1191 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 APOFQ13790 326 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 LINC01590Q5TEZ4 76 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 NIPAL3Q6P499 406 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 PLBD1Q6P4A8 553 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 C19orf48Q6RUI8 117 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 PLXDC2Q6UX71 529 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 CREB3L2Q70SY1 520 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 CXXC5Q7LFL8 322 aaKnown RBP7.34□□□□□ -1.23
USP4-210ENST00000483212 ADCK1Q86TW2 530 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 UEVLDQ8IX04 471 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 CYB561A3Q8NBI2 242 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 BPIFB6Q8NFQ5 453 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 OR9K2Q8NGE7 335 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 ROBO4Q8WZ75 1007 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 ZHX1-C8orf76Q96EF9 292 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 PLEKHA8Q96JA3 519 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 KCNK17Q96T54 332 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 SLX1AQ9BQ83 275 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 ARHGAP9Q9BRR9 750 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 TEX12Q9BXU0 123 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 MRPL13Q9BYD1 178 aaKnown RBP7.34□□□□□ -1.23
USP4-210ENST00000483212 EXO5Q9H790 373 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 MED20Q9H944 212 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 MRPS18AQ9NVS2 196 aaKnown RBP7.34□□□□□ -1.23
USP4-210ENST00000483212 CLN6Q9NWW5 311 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 PAQR5Q9NXK6 330 aaPredicted RBP7.34□□□□□ -1.23
USP4-210ENST00000483212 GRHPRQ9UBQ7 328 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 MYRFQ9Y2G1 1151 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 FLVCR1Q9Y5Y0 555 aa7.34□□□□□ -1.23
USP4-210ENST00000483212 TLN1Q9Y490 2541 aaKnown RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 ACACBO00763 2458 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 IGLV1-36A0A0B4J1U3 117 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 A0A1W2PRG6 482 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 SLC22A23A1A5C7 686 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 PRSS37A4D1T9 235 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 MAGEA13PA6NCF6 341 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 OR14I1A6ND48 311 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 A6NIZ1 184 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 CLCA1A8K7I4 914 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 PRR23D1E9PI22 279 aaPredicted RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 H7C1C5 153 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 DCTN6O00399 190 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 ARHGEF9O43307 516 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 TRMUO75648 421 aaKnown RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 SERPINI2O75830 405 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 ZNF432O94892 652 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 BCL10O95999 233 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 PGA4P0DJD7 388 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 PGA3P0DJD8 388 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 PRR23D2P0DMB1 279 aaPredicted RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 PIPP12273 146 aaPredicted RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 ZNF3P17036 446 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 SPI1P17947 270 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 ACVR2AP27037 513 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 HTR1FP30939 366 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 ACVR1BP36896 505 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 CDH11P55287 796 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 CDH15P55291 814 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 BIDP55957 195 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 RAP1BP61224 184 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 RPS3AP61247 264 aaKnown RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 LCN6P62502 163 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 RAP1AP62834 184 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 CSNK2BP67870 215 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 MVKQ03426 396 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 PON3Q15166 354 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 HIST3H3Q16695 136 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 PRR30Q53SZ7 412 aaPredicted RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 FAM205BPQ63HN1 556 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 TMEM225Q6GV28 225 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 LEG1Q6P5S2 330 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 FAM180AQ6UWF9 173 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 B3GNT6Q6ZMB0 384 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 MEPCEQ7L2J0 689 aaKnown RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 FCRLAQ7L513 359 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 GPAT4Q86UL3 456 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 ZBTB46Q86UZ6 589 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 JAZF1Q86VZ6 243 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 TMEM123Q8N131 208 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 OR6V1Q8N148 313 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 OR9Q1Q8NGQ5 310 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 OR6X1Q8NH79 312 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 FNDC9Q8TBE3 224 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 ABHD3Q8WU67 409 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 FAR1Q8WVX9 515 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 GGHQ92820 318 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 SARAFQ96BY9 339 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 SNRNP40Q96DI7 357 aaKnown RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 Q96MT0 163 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 ZNF385AQ96PM9 386 aaKnown RBP7.33□□□□□ -1.24
USP4-210ENST00000483212 OR2M2Q96R28 347 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 EMC6Q9BV81 110 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 SLC25A18Q9H1K4 315 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 RNF122Q9H9V4 155 aa7.33□□□□□ -1.24
USP4-210ENST00000483212 AMBNQ9NP70 447 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms