RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PTDSS1P48651 473 aaKnown RBP6.32□□□□□ -1.4
CSDE1-206ENST00000483030 RPL14P50914 215 aaKnown RBP6.32□□□□□ -1.4
CSDE1-206ENST00000483030 ABCE1P61221 599 aaKnown RBP6.32□□□□□ -1.4
CSDE1-206ENST00000483030 RAB1AP62820 205 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 MRPS11P82912 194 aaKnown RBP6.32□□□□□ -1.4
CSDE1-206ENST00000483030 GALK2Q01415 458 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 MVKQ03426 396 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 RAB39AQ14964 217 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 MFSD13AQ14CX5 517 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 FXNQ16595 210 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 MS4A18Q3C1V0 323 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 ALKBH6Q3KRA9 238 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 RPS26P11Q5JNZ5 115 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-206ENST00000483030 PRR31Q5SQ13 230 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 AVPI1Q5T686 147 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 RNF220Q5VTB9 566 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 REP15Q6BDI9 236 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 ACSM5Q6NUN0 579 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 H1FNTQ75WM6 255 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-206ENST00000483030 C20orf196Q8IYI0 205 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 ZDHHC22Q8N966 263 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF417Q8TAU3 575 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 MGARPQ8TDB4 240 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 C22orf15Q8WYQ4 148 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 TXNDC15Q96J42 360 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF587Q96SQ5 575 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-206ENST00000483030 SLC6A7Q99884 636 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 EMC6Q9BV81 110 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF416Q9BWM5 594 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 SPATA9Q9BWV2 254 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 SUCNR1Q9BXA5 334 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 NUF2Q9BZD4 464 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 ARMC7Q9H6L4 198 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 CACYBPQ9HB71 228 aaKnown RBP6.32□□□□□ -1.4
CSDE1-206ENST00000483030 ESM1Q9NQ30 184 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 SLC52A3Q9NQ40 469 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 G6PC2Q9NQR9 355 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 SLC6A13Q9NSD5 602 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 CALML5Q9NZT1 146 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 P2RX2Q9UBL9 471 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 LGALS13Q9UHV8 139 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 POFUT2Q9Y2G5 429 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 RAP2CQ9Y3L5 183 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 DYSFO75923 2080 aa6.32□□□□□ -1.4
CSDE1-206ENST00000483030 DSPPQ9NZW4 1301 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 A0A0G2JMP0 313 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 A0A0G2JPF8 293 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 A0A0X1KG70 313 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF726A6NNF4 738 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 HNRNPCL2B2RXH8 293 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 HNRNPCL3B7ZW38 293 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 RFXANKO14593 260 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 TRAF3IP2O43734 574 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 AKAP8O43823 692 aaKnown RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 OR2T1O43869 369 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 TYROBPO43914 113 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 HNRNPCL1O60812 293 aaKnown RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 RAB36O95755 333 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 CLPTM1O96005 669 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 HPRP00739 348 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 SERPINE1P05121 402 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 ALDOCP09972 364 aaKnown RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 PATE4P0C8F1 98 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 HNRNPCL4P0DMR1 293 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 B4GALT1P15291 398 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 NQO1P15559 274 aaKnown RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 SLC1A6P48664 564 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 MVDP53602 400 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 CRISP3P54108 245 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 DSTNP60981 165 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 RPS23P62266 143 aaKnown RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 CCL8P80075 99 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 DEFA6Q01524 100 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 IFFO1Q0D2I5 559 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 CAMK2DQ13557 499 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 NKPD1Q17RQ9 610 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 FAM69AQ5T7M9 428 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 C1QL2Q7Z5L3 287 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 NET1Q7Z628 596 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 WDFY1Q8IWB7 410 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 UEVLDQ8IX04 471 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 BPIFB2Q8N4F0 458 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 OR4M2Q8NGB6 313 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 OR6N1Q8NGY5 312 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 NANPQ8TBE9 248 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 LRR1Q96L50 414 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 ZBTB18Q99592 522 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF747Q9BV97 191 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 TMPRSS13Q9BYE2 586 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF385DQ9H6B1 395 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF665Q9H7R5 613 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF696Q9H7X3 374 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 B3GAT2Q9NPZ5 323 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 HINT3Q9NQE9 182 aaKnown RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 DDX28Q9NUL7 540 aaKnown RBP6.31□□□□□ -1.4
CSDE1-206ENST00000483030 PNPOQ9NVS9 261 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 MED29Q9NX70 200 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 ZNF224Q9NZL3 707 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 TAAR3PQ9P1P4 343 aa6.31□□□□□ -1.4
CSDE1-206ENST00000483030 RPS6KB2Q9UBS0 482 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms