RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TAF8Q7Z7C8 310 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 ZNF615Q8N8J6 731 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 C19orf47Q8N9M1 422 aaKnown RBP13.51□□□□□ -0.25
ATG4B-220ENST00000482507 OR10AC1Q8NH08 325 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 C1orf216Q8TAB5 229 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 NXPE2Q96DL1 559 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 PRMT8Q9NR22 394 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-220ENST00000482507 PRTFDC1Q9NRG1 225 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 CA10Q9NS85 328 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 KLHL9Q9P2J3 617 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 SPAG17Q6Q759 2223 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 A0A1W2PR77 199 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 TVP23AA6NH52 213 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 ZSCAN5BA6NJL1 495 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 PDCD5O14737 125 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 NUDT1P36639 197 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 BLVRAP53004 296 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 HHEXQ03014 270 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 HSF2Q03933 536 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 EGR4Q05215 589 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 SNTA1Q13424 505 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 ZNF74Q16587 644 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 FAM69AQ5T7M9 428 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 KANSL1Q7Z3B3 1105 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 ATG4DQ86TL0 474 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-220ENST00000482507 LRRTM1Q86UE6 522 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 OOSP2Q86WS3 158 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 LSM14AQ8ND56 463 aaKnown RBP13.51□□□□□ -0.25
ATG4B-220ENST00000482507 CEP76Q8TAP6 659 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 DGAT2Q96PD7 388 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 CHIAQ9BZP6 476 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 SRA1Q9HD15 236 aaKnown RBP13.51□□□□□ -0.25
ATG4B-220ENST00000482507 FSCN3Q9NQT6 498 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 NPDC1Q9NQX5 325 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-220ENST00000482507 GLTPQ9NZD2 209 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 PIPOXQ9P0Z9 390 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 PCDHGA5Q9Y5G8 931 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 TRAV8-7A0A075B6U6 113 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 KIR2DS5A0A0G2JLQ3 304 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 A0A0G2JNG1 304 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 ANKRD20A5PA0PJZ0 165 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 KIR2DS3K7RE56 304 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 GPANK1O95872 356 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 TGM6O95932 706 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 PRPS1P60891 318 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 FUT7Q11130 342 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 KIR2DS5Q14953 304 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 LPAL2Q16609 132 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 LINC00303Q3SY05 128 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 ELFN2Q5R3F8 820 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 TMEM69Q5SWH9 247 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 FNDC7Q5VTL7 733 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 OTPQ5XKR4 325 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 C10orf53Q8N6V4 93 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 ZNF321PQ8N8H1 164 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 DTWD2Q8NBA8 298 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 FAM71CQ8NEG0 241 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 SUN5Q8TC36 379 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 NARFLQ9H6Q4 476 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 DIABLOQ9NR28 239 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 HIF3AQ9Y2N7 669 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 ELOA3DA6NLF2 546 aaPredicted RBP13.5□□□□□ -0.25
ATG4B-220ENST00000482507 H0YC42 278 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 SDC3O75056 442 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 KHDRBS3O75525 346 aaKnown RBP13.5□□□□□ -0.25
ATG4B-220ENST00000482507 CD14P08571 375 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 ZNF250P15622 560 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 ANXA7P20073 488 aaKnown RBP13.5□□□□□ -0.25
ATG4B-220ENST00000482507 PSMD4P55036 377 aaKnown RBP13.5□□□□□ -0.25
ATG4B-220ENST00000482507 CTXN1P60606 82 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 ALKBH1Q13686 389 aaKnown RBP13.5□□□□□ -0.25
ATG4B-220ENST00000482507 ELOA3BQ3SY89 546 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 SLC25A25Q6KCM7 469 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 MED25Q71SY5 747 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 SLC16A9Q7RTY1 509 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 FTMTQ8N4E7 242 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 ELOA3Q8NG57 546 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 OR51A4Q8NGJ6 313 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 FCAMRQ8WWV6 532 aa13.5□□□□□ -0.25
ATG4B-220ENST00000482507 GPR179Q6PRD1 2367 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 A0A1B0GUH1 482 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 C17orf51A8MQB3 221 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 SHOXO15266 292 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 ITGA10O75578 1167 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 SCO1O75880 301 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 CCR4P51679 360 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 SLC25A1P53007 311 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 AP2S1P53680 142 aaPredicted RBP13.49□□□□□ -0.25
ATG4B-220ENST00000482507 SKP2Q13309 424 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 CSRP2Q16527 193 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATG4B-220ENST00000482507 Q499Y3 187 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 MESTQ5EB52 335 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 JAZF1Q86VZ6 243 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 DND1Q8IYX4 353 aaKnown RBP13.49□□□□□ -0.25
ATG4B-220ENST00000482507 OR5AK2Q8NH90 309 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 HAVCR1Q96D42 359 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 DNAJA3Q96EY1 480 aa13.49□□□□□ -0.25
ATG4B-220ENST00000482507 S100A16Q96FQ6 103 aaKnown RBP13.49□□□□□ -0.25
ATG4B-220ENST00000482507 LCORQ96JN0 433 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms