RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ULBP3Q9BZM4 244 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.08□□□□□ -0.32
CHD3-211ENST00000481999 RPRD1BQ9NQG5 326 aaKnown RBP13.08□□□□□ -0.32
CHD3-211ENST00000481999 MRTO4Q9UKD2 239 aaKnown RBP13.08□□□□□ -0.32
CHD3-211ENST00000481999 ZNF337Q9Y3M9 751 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 NOX1Q9Y5S8 564 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 OPN1LWP04000 364 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 GZMKP49863 264 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 RAB25P57735 213 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 DCAF7P61962 342 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 RPL18Q07020 188 aaKnown RBP13.08□□□□□ -0.32
CHD3-211ENST00000481999 FAPQ12884 760 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 EFR3AQ14156 821 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 ANGPT1Q15389 498 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 ARSKQ6UWY0 536 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 IL20RBQ6UXL0 311 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 CPEB2Q7Z5Q1 589 aaKnown RBP13.08□□□□□ -0.32
CHD3-211ENST00000481999 OR13C5Q8NGS8 318 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 OR5J2Q8NH18 312 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 TRIM63Q969Q1 353 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 PGLYRP3Q96LB9 341 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 LRFN5Q96NI6 719 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 GON7Q9BXV9 100 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 SEMA4CQ9C0C4 833 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 LAT2Q9GZY6 243 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 NRIP3Q9NQ35 241 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 MED11Q9P086 117 aa13.08□□□□□ -0.32
CHD3-211ENST00000481999 A0A0G2JK05 382 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 C1QBP02746 253 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 PNLIPRP2P54317 469 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 OR10A3P58181 314 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 BTG1P62324 171 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 GPR176Q14439 515 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 TP53I3Q53FA7 332 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ACSM3Q53FZ2 586 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 HACD4Q5VWC8 232 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ZNF511Q8NB15 262 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 TRMT10AQ8TBZ6 339 aaKnown RBP13.07□□□□□ -0.32
CHD3-211ENST00000481999 MR1Q95460 341 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ADAM19Q9H013 955 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 EXOSC3Q9NQT5 275 aaKnown RBP13.07□□□□□ -0.32
CHD3-211ENST00000481999 SERPINA3P01011 423 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ASAH2BP0C7U1 165 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ACVR1BP36896 505 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 GRK6P43250 576 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 CTXN1P60606 82 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 RPS18P62269 152 aaKnown RBP13.07□□□□□ -0.32
CHD3-211ENST00000481999 ZSWIM7Q19AV6 140 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ALG10Q5BKT4 473 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 PYHIN1Q6K0P9 492 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 MRPL14Q6P1L8 145 aaKnown RBP13.07□□□□□ -0.32
CHD3-211ENST00000481999 LEG1Q6P5S2 330 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ZNF440Q8IYI8 595 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 LSM14AQ8ND56 463 aaKnown RBP13.07□□□□□ -0.32
CHD3-211ENST00000481999 OR10G3Q8NGC4 313 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 GPR119Q8TDV5 335 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 RHBDD1Q8TEB9 315 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 AKAP1Q92667 903 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHD3-211ENST00000481999 GHSRQ92847 366 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ABCG5Q9H222 651 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ACOXLQ9NUZ1 547 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 MCUBQ9NWR8 336 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 COPS3Q9UNS2 423 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 B3GALT1Q9Y5Z6 326 aa13.07□□□□□ -0.32
CHD3-211ENST00000481999 ANKRD34BA5PLL1 514 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 PRR32B1ATL7 298 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
CHD3-211ENST00000481999 PAHP00439 452 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 PNMTP11086 282 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 CXCR1P25024 350 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 ZFP36L1Q07352 338 aaKnown RBP13.06□□□□□ -0.32
CHD3-211ENST00000481999 C19orf57Q0VDD7 668 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 Q5BKY6 102 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 ASB18Q6ZVZ8 466 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 FAM122BQ7Z309 247 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 PLCZ1Q86YW0 608 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 ZBTB44Q8NCP5 570 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 OR5M1Q8NGP8 315 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 FBXO4Q9UKT5 387 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 TRAV1-2A0A0B4J238 106 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 TMEM72A0PK05 275 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 ARHGEF9O43307 516 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 CPNE3O75131 537 aaKnown RBP13.06□□□□□ -0.32
CHD3-211ENST00000481999 PPM1BO75688 479 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 UMODP07911 640 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 RAB3BP20337 219 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 AHCYP23526 432 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 AGFG1P52594 562 aaKnown RBP13.06□□□□□ -0.32
CHD3-211ENST00000481999 SLC26A5P58743 744 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 ACTA2P62736 377 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 ACTG2P63267 376 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 MAB21L1Q13394 359 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 TNK1Q13470 666 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 BTBD16Q32M84 506 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 PLA1AQ53H76 456 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 DPY19L2P2Q6ZN68 376 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 ADGRG3Q86Y34 549 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 SYS1Q8N2H4 156 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 LRRC75AQ8NAA5 344 aa13.06□□□□□ -0.32
CHD3-211ENST00000481999 POMGNT2Q8NAT1 580 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms