RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 SF3B4Q15427 424 aaKnown RBP eCLIP11.23□□□□□ -0.61
SIK3-209ENST00000480222 ZNF362Q5T0B9 420 aaPredicted RBP11.23□□□□□ -0.61
SIK3-209ENST00000480222 LCN1P1Q5VSP4 162 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 AADACL4Q5VUY2 407 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 ZNF324BQ6AW86 544 aaPredicted RBP11.23□□□□□ -0.61
SIK3-209ENST00000480222 NIPAL3Q6P499 406 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 PLBD1Q6P4A8 553 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 LEG1Q6P5S2 330 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 TEX19Q8NA77 164 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 NPEPL1Q8NDH3 523 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 OR9K2Q8NGE7 335 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 FNDC8Q8TC99 324 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 IPCEF1Q8WWN9 437 aaPredicted RBP11.23□□□□□ -0.61
SIK3-209ENST00000480222 ZNF845Q96IR2 970 aaPredicted RBP11.23□□□□□ -0.61
SIK3-209ENST00000480222 ZNF582Q96NG8 517 aaPredicted RBP11.23□□□□□ -0.61
SIK3-209ENST00000480222 UCN2Q96RP3 112 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 ALG12Q9BV10 488 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 CNOT2Q9NZN8 540 aaKnown RBP11.23□□□□□ -0.61
SIK3-209ENST00000480222 VSX1Q9NZR4 365 aaPredicted RBP11.23□□□□□ -0.61
SIK3-209ENST00000480222 EMC3Q9P0I2 261 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 KLHL9Q9P2J3 617 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 ZNF346Q9UL40 294 aaKnown RBP11.23□□□□□ -0.61
SIK3-209ENST00000480222 CAMK2AQ9UQM7 478 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 RCE1Q9Y256 329 aa11.23□□□□□ -0.61
SIK3-209ENST00000480222 RPL36Q9Y3U8 105 aaKnown RBP11.23□□□□□ -0.61
SIK3-209ENST00000480222 IGKV3D-15A0A087WSY6 115 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 PRSS37A4D1T9 235 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 EFCAB10A6NFE3 127 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 ZNF716A6NP11 495 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 GPR171O14626 319 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 MRPS14O60783 128 aaKnown RBP11.22□□□□□ -0.61
SIK3-209ENST00000480222 RAMP1O60894 148 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 IGHG1P01857 330 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 HLA-DOBP13765 273 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 HTR1FP30939 366 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 ACVR1BP36896 505 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 ZNF91Q05481 1191 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 MELKQ14680 651 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 PON3Q15166 354 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 RNPS1Q15287 305 aaKnown RBP11.22□□□□□ -0.61
SIK3-209ENST00000480222 SMN1Q16637 294 aaKnown RBP11.22□□□□□ -0.61
SIK3-209ENST00000480222 SLC35D3Q5M8T2 416 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 DNM1P34Q6PK57 102 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 NHLRC1Q6VVB1 395 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 CPOQ8IVL8 374 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 KDM8Q8N371 416 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 BPIFB6Q8NFQ5 453 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 OR2T4Q8NH00 348 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 OR6X1Q8NH79 312 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 ZPLD1Q8TCW7 415 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 MED12Q93074 2177 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 NMNAT3Q96T66 252 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 SLX1AQ9BQ83 275 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 HELZ2Q9BYK8 2649 aaKnown RBP11.22□□□□□ -0.61
SIK3-209ENST00000480222 NMNAT2Q9BZQ4 307 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 RNF122Q9H9V4 155 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 GP6Q9HCN6 339 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 H2AFY2Q9P0M6 372 aaPredicted RBP11.22□□□□□ -0.61
SIK3-209ENST00000480222 LUZP4Q9P127 313 aa11.22□□□□□ -0.61
SIK3-209ENST00000480222 WARS2Q9UGM6 360 aaKnown RBP11.22□□□□□ -0.61
SIK3-209ENST00000480222 ZNF407Q9C0G0 2248 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 A0A1B0GTH9 108 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 OR6C68A6NDL8 312 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 FAM183AA6NL82 134 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 CLCA1A8K7I4 914 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 RPSAP08865 295 aaKnown RBP11.21□□□□□ -0.61
SIK3-209ENST00000480222 DBTP11182 482 aaKnown RBP11.21□□□□□ -0.61
SIK3-209ENST00000480222 KLK2P20151 261 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 SLC2A5P22732 501 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 PTGER4P35408 488 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 CENPAP49450 140 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 NUDT6P53370 316 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 BIDP55957 195 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 SLC35A2P78381 396 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 RASGEF1BQ0VAM2 473 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 POU4F2Q12837 409 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 EEF1A1P5Q5VTE0 462 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 GTF2IRD2BQ6EKJ0 949 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 CREB3L2Q70SY1 520 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 ADGRE4PQ86SQ3 457 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 GTF2IRD2Q86UP8 949 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 EXD3Q8N9H8 876 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 CYB561A3Q8NBI2 242 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 ZNF540Q8NDQ6 660 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 NOXO1Q8NFA2 376 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 FAR1Q8WVX9 515 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 TMEM45BQ96B21 275 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 OTULINQ96BN8 352 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 WBP1Q96G27 269 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 SLC25A44Q96H78 314 aaPredicted RBP11.21□□□□□ -0.61
SIK3-209ENST00000480222 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 DDOQ99489 341 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 TUBA1CQ9BQE3 449 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 PRRG4Q9BZD6 226 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 RACGAP1Q9H0H5 632 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 SYT4Q9H2B2 425 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 DUSP21Q9H596 190 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 FKBP14Q9NWM8 211 aa11.21□□□□□ -0.61
SIK3-209ENST00000480222 MED29Q9NX70 200 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms