RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 MUS81Q96NY9 551 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 DDOQ99489 341 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 ANKRD60Q9BZ19 345 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 TXNIPQ9H3M7 391 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 MED20Q9H944 212 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 TIGARQ9NQ88 270 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 HINT3Q9NQE9 182 aaKnown RBP7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 CMC2Q9NRP2 79 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 PAQR5Q9NXK6 330 aaPredicted RBP7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 TVP23BQ9NYZ1 205 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 ENOPH1Q9UHY7 261 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 SH3BGRL2Q9UJC5 107 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 RALYQ9UKM9 306 aaKnown RBP7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 ZNF346Q9UL40 294 aaKnown RBP7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 MCTS1Q9ULC4 181 aaKnown RBP7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 RNF6Q9Y252 685 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 NOX1Q9Y5S8 564 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 RELNP78509 3460 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 MYO7BQ6PIF6 2116 aa7.96□□□□□ -1.14
NUDCD3-208ENST00000480209 IGKV1D-43A0A0B4J1Z2 117 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 A0A1W2PRG6 482 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 SLC35F4A4IF30 521 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 OR6C68A6NDL8 312 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 MBD3L4A6NDZ8 208 aaPredicted RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 MBD3L3A6NE82 208 aaPredicted RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 MBD3L5A6NJ08 208 aaPredicted RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 CD8B2A6NJW9 211 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 FAM183AA6NL82 134 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 DCTN6O00399 190 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 WDR1O75083 606 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 WBP4O75554 376 aaKnown RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 TRMUO75648 421 aaKnown RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 ZNF432O94892 652 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 VAMP5O95183 116 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 PGA4P0DJD7 388 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 PGA3P0DJD8 388 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 CLUP10909 449 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 APEHP13798 732 aaKnown RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 ZNF43P17038 809 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 ACVR1BP36896 505 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 PCYT1AP49585 367 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 RPS6KA3P51812 740 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 ISL1P61371 349 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 MYBPC1Q00872 1141 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 FMODQ06828 376 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 FOXF2Q12947 444 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 CAMK2DQ13557 499 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 ESPL1Q14674 2120 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 MAD2L1BPQ15013 274 aaPredicted RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 CARD17Q5XLA6 110 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 NSUN5P2Q63ZY6 315 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 TMEM225Q6GV28 225 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 LINGO2Q7L985 606 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 CHMP1BQ7LBR1 199 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 NUFIP2Q7Z417 695 aaKnown RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 TUSC5Q8IXB3 177 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 TCEANCQ8N8B7 351 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 NPEPL1Q8NDH3 523 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 ZNF555Q8NEP9 628 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 NOXO1Q8NFA2 376 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 OR52E2Q8NGJ4 325 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 MBD3L2Q8NHZ7 208 aaPredicted RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 CNIH3Q8TBE1 160 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 FBLIM1Q8WUP2 373 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 NMD3Q96D46 503 aaKnown RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 OR2M2Q96R28 347 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 IL4I1Q96RQ9 567 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 KCNK17Q96T54 332 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 NMNAT3Q96T66 252 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 SF3B5Q9BWJ5 86 aaKnown RBP7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 BCO1Q9HAY6 547 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 RASSF1Q9NS23 344 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 UBAP1Q9NZ09 502 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 KLHL9Q9P2J3 617 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 RAB26Q9ULW5 256 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 BAIAP2Q9UQB8 552 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 FAM208BQ5VWN6 2430 aa7.95□□□□□ -1.14
NUDCD3-208ENST00000480209 FIGNL2A6NMB9 653 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 AHRRA9YTQ3 701 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 ARHGEF9O43307 516 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 SS18L1O75177 396 aaPredicted RBP7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 GLI4P10075 376 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 FCGR2AP12318 317 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 MYF6P23409 242 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 UQCRFS1P47985 274 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 HSPA13P48723 471 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 DAP3P51398 398 aaKnown RBP7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 CDC42P60953 191 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 TLE1Q04724 770 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 CD47Q08722 323 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 C1DQ13901 141 aaKnown RBP7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 PDK3Q15120 406 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 RNPS1Q15287 305 aaKnown RBP7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 SMN1Q16637 294 aaKnown RBP7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 TTC23Q5W5X9 447 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 NIPAL3Q6P499 406 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 PLBD1Q6P4A8 553 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 LEG1Q6P5S2 330 aa7.94□□□□□ -1.14
NUDCD3-208ENST00000480209 VWA1Q6PCB0 445 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms