RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 OR5B2Q96R09 309 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 NPAS1Q99742 590 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ARPC5LQ9BPX5 153 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 KLHDC3Q9BQ90 382 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 PTDSS2Q9BVG9 487 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 TAPBPLQ9BX59 468 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 RSPO3Q9BXY4 272 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 SRXN1Q9BYN0 137 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 KLHL4Q9C0H6 718 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 C1orf21Q9H246 121 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 MUC13Q9H3R2 512 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 PLEKHF2Q9H8W4 249 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 FKRPQ9H9S5 495 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 SMURF2Q9HAU4 748 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 TCF7L1Q9HCS4 588 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 RLIMQ9NVW2 624 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 MRPL39Q9NYK5 338 aaKnown RBP4.32□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF229Q9UJW7 825 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 SLC13A4Q9UKG4 626 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 MGAT4BQ9UQ53 548 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 FLVCR1Q9Y5Y0 555 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 TACC2O95359 2948 aa4.32□□□□□ -1.72
PTCD3-213ENST00000480102 CCDC88CQ9P219 2028 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 DCHS2Q6V1P9 2916 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 IGKV1D-42A0A075B6H8 117 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 ARPC4-TTLL3A0A0A6YYG9 625 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 A0A1B0GWA3 101 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 A0A1W2PRQ8 180 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 TMEM72A0PK05 275 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 OR5H1A6NKK0 313 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 KDM4EB2RXH2 506 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF814B7Z6K7 855 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 ZNHIT1O43257 154 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 AKAP8O43823 692 aaKnown RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 TPST2O60704 377 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 LYPD3O95274 346 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 FAM107AO95990 144 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 C1QCP02747 245 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 ASAH2BP0C7U1 165 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 PRG2P13727 222 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 LOXP28300 417 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 UQCRC1P31930 480 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 RYKP34925 604 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 SFTPDP35247 375 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 SLC7A2P52569 658 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 RGS8P57771 180 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 MTPNP58546 118 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 CD83Q01151 205 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 POU3F1Q03052 451 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 FAM27E3Q08E93 113 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 ST3GAL3Q11203 375 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 DGCR6Q14129 220 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 MTX3Q5HYI7 312 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 RABL3Q5HYI8 236 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 SAMD4BQ5PRF9 694 aaKnown RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 GKAP1Q5VSY0 366 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 FAM205BPQ63HN1 556 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 PAMR1Q6UXH9 720 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 CREB3L2Q70SY1 520 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 C1orf174Q8IYL3 243 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 MICU2Q8IYU8 434 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 OFCC1Q8IZS5 231 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 PGAM4Q8N0Y7 254 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF611Q8N823 705 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 CNEP1R1Q8N9A8 125 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 IL17RDQ8NFM7 739 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 GPR32P1Q8NGA4 272 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 OR6T1Q8NGN1 323 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 NFKBIDQ8NI38 313 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 PROX1Q92786 737 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 DVL3Q92997 716 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 APH1AQ96BI3 265 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 TAMM41Q96BW9 452 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 NEIL1Q96FI4 390 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 OXGR1Q96P68 337 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 WACQ9BTA9 647 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 ESRP2Q9H6T0 727 aaKnown RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 BEX4Q9NWD9 120 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 C14orf119Q9NWQ9 140 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 ASB6Q9NWX5 421 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 SELENONQ9NZV5 590 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 B3GAT1Q9P2W7 334 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 CRNNQ9UBG3 495 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 RPS6KB2Q9UBS0 482 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 RPS6KA6Q9UK32 745 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 FBXL3Q9UKT7 428 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 SAMD4AQ9UPU9 718 aaKnown RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 MYRFQ9Y2G1 1151 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 NOSIPQ9Y314 301 aaKnown RBP4.31□□□□□ -1.72
PTCD3-213ENST00000480102 NOX1Q9Y5S8 564 aa4.31□□□□□ -1.72
PTCD3-213ENST00000480102 UTP20O75691 2785 aaKnown RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 TPST1O60507 370 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 PDE5AO76074 875 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 PRSS23O95084 383 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 MT-ND1P03886 318 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 RAF1P04049 648 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 TFPIP10646 304 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 APEHP13798 732 aaKnown RBP4.3□□□□□ -1.72
PTCD3-213ENST00000480102 ZNF43P17038 809 aa4.3□□□□□ -1.72
PTCD3-213ENST00000480102 ITGA2P17301 1181 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms