RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	TAPBPL	Q9BX59	468 aa		13.66	□□□□□ -0.22
HDLBP-238	ENST00000479894	NDUFAF4	Q9P032	175 aa		13.66	□□□□□ -0.22
HDLBP-238	ENST00000479894	AURKC	Q9UQB9	309 aa		13.66	□□□□□ -0.22
HDLBP-238	ENST00000479894	TCRBV3S1	A0A5B6	114 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	ABCD4	O14678	606 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	AHSA1	O95433	338 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	TGFA	P01135	160 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	FCGR1A	P12314	374 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	APEH	P13798	732 aa	Known RBP	13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	PTN	P21246	168 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	IFNGR2	P38484	337 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	CDH12	P55289	794 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	SLC35A1	P78382	337 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	GGTLC2	Q14390	218 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	HBM	Q6B0K9	141 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	ZFP1	Q6P2D0	407 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	COMTD1	Q86VU5	262 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	RNF113B	Q8IZP6	322 aa	Known RBP	13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	FBXL14	Q8N1E6	418 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	MUC15	Q8N387	334 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	ATP6V1C2	Q8NEY4	427 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	OR2V1	Q8NHB1	315 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	CPNE4	Q96A23	557 aa	Predicted RBP	13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	C7orf34	Q96L11	122 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	TMCC3	Q9ULS5	477 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	SLC7A7	Q9UM01	511 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	MGAT4B	Q9UQ53	548 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894		V9GYQ6	96 aa		13.65	□□□□□ -0.22
HDLBP-238	ENST00000479894	TRAV36DV7	A0A075B6V5	113 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894		A0A1W2PRQ8	180 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	SULT2B1	O00204	365 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	RRP9	O43818	475 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	TPST2	O60704	377 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	PMS2P2	O95744	297 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	IGF2	P01344	180 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	SEMG1	P04279	462 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	H1F0	P07305	194 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	BMP4	P12644	408 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	GTF2E2	P29084	291 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	MAGEA2	P43356	314 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	RAC3	P60763	192 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	ACTR3	P61158	418 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	PIN1	Q13526	163 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	DGCR6	Q14129	220 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	TAF11	Q15544	211 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	TMEM201	Q5SNT2	666 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	PRR31	Q5SQ13	230 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	TMPPE	Q6ZT21	453 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	RBM45	Q8IUH3	476 aa	Known RBP	13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	OR4D11	Q8NGI4	311 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	OR5B2	Q96R09	309 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	NAA11	Q9BSU3	229 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	CHID1	Q9BWS9	393 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	GP6	Q9HCN6	339 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	MED31	Q9Y3C7	131 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	TRRAP	Q9Y4A5	3859 aa		13.64	□□□□□ -0.23
HDLBP-238	ENST00000479894	TMEM89	A2RUT3	159 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	SHISA8	B8ZZ34	492 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894		E7EQL1	145 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	hCG_2039718	K7EN88	272 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	GNGT2	O14610	69 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	CXCL13	O43927	109 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	ADA	P00813	363 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	MT-ATP6	P00846	226 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	CCNA2	P20248	432 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	TNFRSF1B	P20333	461 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	SFTPD	P35247	375 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	SRP14	P37108	136 aa	Known RBP	13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	NR4A2	P43354	598 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	PDLIM4	P50479	330 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	ARHGDIA	P52565	204 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	PPA1	Q15181	289 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	C1orf140	Q5VVS0	124 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	LINC00114	Q6XXX2	140 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	ADGRG5	Q8IZF4	528 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	SLC43A2	Q8N370	569 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	PAPD5	Q8NDF8	572 aa	Known RBP	13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	SEMA6D	Q8NFY4	1073 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	MFSD8	Q8NHS3	518 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	HTRA1	Q92743	480 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	OSTF1	Q92882	214 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	STMN2	Q93045	179 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	MUCL1	Q96DR8	90 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	DUS3L	Q96G46	650 aa	Known RBP	13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	PIMREG	Q9BSJ6	248 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	TMEM185B	Q9H7F4	350 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	REEP1	Q9H902	201 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	NMNAT1	Q9HAN9	279 aa	Predicted RBP	13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	A4GNT	Q9UNA3	340 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	TMEM5	Q9Y2B1	443 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	CORIN	Q9Y5Q5	1042 aa		13.63	□□□□□ -0.23
HDLBP-238	ENST00000479894	TMEM72	A0PK05	275 aa		13.62	□□□□□ -0.23
HDLBP-238	ENST00000479894	DEAF1	O75398	565 aa	Predicted RBP	13.62	□□□□□ -0.23
HDLBP-238	ENST00000479894	VAMP5	O95183	116 aa		13.62	□□□□□ -0.23
HDLBP-238	ENST00000479894	GADD45G	O95257	159 aa		13.62	□□□□□ -0.23
HDLBP-238	ENST00000479894	HIST1H2AB	P04908	130 aa		13.62	□□□□□ -0.23
HDLBP-238	ENST00000479894	RRM2	P31350	389 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms