RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 SGMS2Q8NHU3 365 aa11.43□□□□□ -0.58
ABCF1-206ENST00000479542 FAM216AQ8WUB2 273 aa11.43□□□□□ -0.58
ABCF1-206ENST00000479542 SLC47A1Q96FL8 570 aa11.43□□□□□ -0.58
ABCF1-206ENST00000479542 SPATA5L1Q9BVQ7 753 aa11.43□□□□□ -0.58
ABCF1-206ENST00000479542 MRPL39Q9NYK5 338 aaKnown RBP11.43□□□□□ -0.58
ABCF1-206ENST00000479542 NKIRAS2Q9NYR9 191 aa11.43□□□□□ -0.58
ABCF1-206ENST00000479542 KLHL14Q9P2G3 628 aa11.43□□□□□ -0.58
ABCF1-206ENST00000479542 IGKV1D-42A0A075B6H8 117 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 A0A1B0GWA3 101 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 TMEM89A2RUT3 159 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 CLIC1O00299 241 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 UBL3O95164 117 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 TGDSO95455 350 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 GAAP10253 952 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 HOXB9P17482 250 aaPredicted RBP11.42□□□□□ -0.58
ABCF1-206ENST00000479542 IDH3AP50213 366 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 POLR2JP52435 117 aaKnown RBP11.42□□□□□ -0.58
ABCF1-206ENST00000479542 LMO4P61968 165 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 RAB1AP62820 205 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 MSMPQ1L6U9 139 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 NRN1LQ496H8 165 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 ALG10BQ5I7T1 473 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 RPS26P11Q5JNZ5 115 aaPredicted RBP11.42□□□□□ -0.58
ABCF1-206ENST00000479542 DPPA2Q7Z7J5 298 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 MIER2Q8N344 545 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.42□□□□□ -0.58
ABCF1-206ENST00000479542 OR9I1Q8NGQ6 314 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 OR51F2Q8NH61 342 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 CLDND2Q8NHS1 167 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 ZNF418Q8TF45 676 aaPredicted RBP11.42□□□□□ -0.58
ABCF1-206ENST00000479542 DYDC1Q8WWB3 177 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 GTF2H4Q92759 462 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 TMEM43Q9BTV4 400 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 PLA2G12AQ9BZM1 189 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 INTS9Q9NV88 658 aaKnown RBP11.42□□□□□ -0.58
ABCF1-206ENST00000479542 HIF1ANQ9NWT6 349 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 ZNF224Q9NZL3 707 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 SEC14L4Q9UDX3 406 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 SLC7A8Q9UHI5 535 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 GPR160Q9UJ42 338 aa11.42□□□□□ -0.58
ABCF1-206ENST00000479542 DYSFO75923 2080 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 IGLV3-9A0A075B6K5 115 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 M0R3G1 203 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 SPRY1O43609 319 aaPredicted RBP11.41□□□□□ -0.58
ABCF1-206ENST00000479542 RP2O75695 350 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 SASH3O75995 380 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 HLA-HP01893 362 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 HPXP02790 462 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 BGLAPP02818 100 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 SERPINA5P05154 406 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 SAGP10523 405 aaPredicted RBP11.41□□□□□ -0.58
ABCF1-206ENST00000479542 COL8A2P25067 703 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 LIMS1P48059 325 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 HILS1P60008 231 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 PUDPQ08623 228 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 PHYHD1Q5SRE7 291 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 ZNF813Q6ZN06 617 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 KRT73Q86Y46 540 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 VPS33AQ96AX1 596 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 JMJD8Q96S16 334 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 FOXB1Q99853 325 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 EBF4Q9BQW3 602 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 RSPO3Q9BXY4 272 aaPredicted RBP11.41□□□□□ -0.58
ABCF1-206ENST00000479542 PAIP1Q9H074 479 aaKnown RBP11.41□□□□□ -0.58
ABCF1-206ENST00000479542 C1orf198Q9H425 327 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 OCEL1Q9H607 264 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 METTL17Q9H7H0 456 aaPredicted RBP11.41□□□□□ -0.58
ABCF1-206ENST00000479542 TCF7L2Q9NQB0 619 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 TESQ9UGI8 421 aaKnown RBP11.41□□□□□ -0.58
ABCF1-206ENST00000479542 POFUT2Q9Y2G5 429 aa11.41□□□□□ -0.58
ABCF1-206ENST00000479542 A0A0B4J2E0 115 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 A0A1B0GX12 115 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 PRORSD1PA6NEY8 169 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 ZNF726A6NNF4 738 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 FAM157AC9JC47 383 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 LYNX1G3V0Z9 82 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 TRIM77I1YAP6 450 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 POLR3GO15318 223 aaPredicted RBP11.4□□□□□ -0.58
ABCF1-206ENST00000479542 RAB36O95755 333 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 HPRP00739 348 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 MT-ATP6P00846 226 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 LYNX1P0DP58 116 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 ARAFP10398 606 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 CD79AP11912 226 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 ZNF250P15622 560 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 PPIBP23284 216 aaKnown RBP11.4□□□□□ -0.58
ABCF1-206ENST00000479542 HTR2AP28223 471 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 LSP1P33241 339 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 CAPZA2P47755 286 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 AQP5P55064 265 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 SELENOVP59797 346 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 MYBPC1Q00872 1141 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 GALK2Q01415 458 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 ZP4Q12836 540 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 PCGF3Q3KNV8 242 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 GTDC1Q4AE62 458 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 FAM209AQ5JX71 171 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 LRIF1Q5T3J3 769 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 REEP3Q6NUK4 255 aa11.4□□□□□ -0.58
ABCF1-206ENST00000479542 LINC00114Q6XXX2 140 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms