RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 TMEM225Q6GV28 225 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 NUFIP2Q7Z417 695 aaKnown RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 TUSC5Q8IXB3 177 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 ARIH2OSQ8N7S6 290 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 CYB561A3Q8NBI2 242 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 BBS1Q8NFJ9 593 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 OR4K13Q8NH42 304 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 MBD3L2Q8NHZ7 208 aaPredicted RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 OR2M2Q96R28 347 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 KCNK17Q96T54 332 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 MRPL13Q9BYD1 178 aaKnown RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 NMNAT2Q9BZQ4 307 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 MED20Q9H944 212 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 TIGARQ9NQ88 270 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 ENOPH1Q9UHY7 261 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 MCTS1Q9ULC4 181 aaKnown RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 BAIAP2Q9UQB8 552 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 SPTA1P02549 2419 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 SLC35F4A4IF30 521 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 OR6C68A6NDL8 312 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 FAM183AA6NL82 134 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 DCTN6O00399 190 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 DENRO43583 198 aaKnown RBP11.62□□□□□ -0.55
CHD3-210ENST00000479080 WDR1O75083 606 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 SS18L1O75177 396 aaPredicted RBP11.62□□□□□ -0.55
CHD3-210ENST00000479080 TRMUO75648 421 aaKnown RBP11.62□□□□□ -0.55
CHD3-210ENST00000479080 PGA4P0DJD7 388 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 PGA3P0DJD8 388 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 CLUP10909 449 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 ZNF43P17038 809 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 ACVR2AP27037 513 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 AGTR1P30556 359 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 ACVR1BP36896 505 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 RPS6KA3P51812 740 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHD3-210ENST00000479080 FOXF2Q12947 444 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 MRPL49Q13405 166 aaKnown RBP11.62□□□□□ -0.55
CHD3-210ENST00000479080 AADACL4Q5VUY2 407 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 LINGO2Q7L985 606 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 TCEANCQ8N8B7 351 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 ZNF555Q8NEP9 628 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 OR52E2Q8NGJ4 325 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 RHOXF1Q8NHV9 184 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 CNIH3Q8TBE1 160 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 TMEM163Q8TC26 289 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 PTP4A1Q93096 173 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 WNT2BQ93097 391 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 TMEM45BQ96B21 275 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 IL4I1Q96RQ9 567 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 NMNAT3Q96T66 252 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 CALHM2Q9HA72 323 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 FOXD3Q9UJU5 478 aaPredicted RBP11.62□□□□□ -0.55
CHD3-210ENST00000479080 CFAP46Q8IYW2 2715 aa11.62□□□□□ -0.55
CHD3-210ENST00000479080 PRRC2CQ9Y520 2896 aaKnown RBP11.61□□□□□ -0.55
CHD3-210ENST00000479080 A0A1W2PRG6 482 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 CCDC182A6NF36 153 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 ZNF724A8MTY0 619 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 IDH3BO43837 385 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 BCL10O95999 233 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 GLI4P10075 376 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 GABRA1P14867 456 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 SLC2A5P22732 501 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 FMODQ06828 376 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 ITGADQ13349 1161 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 IL18R1Q13478 541 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 SNAPC1Q16533 368 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 SMN1Q16637 294 aaKnown RBP11.61□□□□□ -0.55
CHD3-210ENST00000479080 HIST3H3Q16695 136 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 GPR139Q6DWJ6 353 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 LEG1Q6P5S2 330 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 GCNT2Q8N0V5 402 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 NOXO1Q8NFA2 376 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 OR6X1Q8NH79 312 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 KISS1RQ969F8 398 aaPredicted RBP11.61□□□□□ -0.55
CHD3-210ENST00000479080 TMEM54Q969K7 222 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 CNBD2Q96M20 576 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 TSSK2Q96PF2 358 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 DMRTA2Q96SC8 542 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 RASSF1Q9NS23 344 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 VSX1Q9NZR4 365 aaPredicted RBP11.61□□□□□ -0.55
CHD3-210ENST00000479080 KLHL9Q9P2J3 617 aa11.61□□□□□ -0.55
CHD3-210ENST00000479080 IGLV1-36A0A0B4J1U3 117 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 SLC22A23A1A5C7 686 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 PRSS37A4D1T9 235 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 FIGNL2A6NMB9 653 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 ARHGEF9O43307 516 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 TLX2O43763 284 aaPredicted RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 UPK3AO75631 287 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 TNFSF13O75888 250 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 HMGN1P05114 100 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 ADRA2AP08913 450 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 ACADSP16219 412 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 CEACAM8P31997 349 aaPredicted RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 KIR2DL2P43627 348 aaPredicted RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 DAP3P51398 398 aaKnown RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 FOXG1P55316 489 aaPredicted RBP11.6□□□□□ -0.55
CHD3-210ENST00000479080 CDC42P60953 191 aa11.6□□□□□ -0.55
CHD3-210ENST00000479080 SNRPGP62308 76 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms