RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 VANGL1Q8TAA9 524 aaPredicted RBP17.81■□□□□ 0.44
TRIM8-203ENST00000479004 MAGEE2Q8TD90 523 aaPredicted RBP17.81■□□□□ 0.44
TRIM8-203ENST00000479004 GEMIN6Q8WXD5 167 aaKnown RBP17.81■□□□□ 0.44
TRIM8-203ENST00000479004 HSH2DQ96JZ2 352 aa17.81■□□□□ 0.44
TRIM8-203ENST00000479004 LRGUKQ96M69 825 aa17.81■□□□□ 0.44
TRIM8-203ENST00000479004 ADAD1Q96M93 576 aaKnown RBP17.81■□□□□ 0.44
TRIM8-203ENST00000479004 MCHR1Q99705 422 aa17.81■□□□□ 0.44
TRIM8-203ENST00000479004 REG4Q9BYZ8 158 aa17.81■□□□□ 0.44
TRIM8-203ENST00000479004 TRIM15Q9C019 465 aa17.81■□□□□ 0.44
TRIM8-203ENST00000479004 SELENONQ9NZV5 590 aa17.81■□□□□ 0.44
TRIM8-203ENST00000479004 ARPC4-TTLL3A0A0A6YYG9 625 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 RPL36A-HNRNPH2H7BZ11 118 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 CBLP22681 906 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 PAX7P23759 505 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 PCSK6P29122 969 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 MS4A2Q01362 244 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 ROR2Q01974 943 aaKnown RBP17.8■□□□□ 0.44
TRIM8-203ENST00000479004 KRTAP1-1Q07627 177 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 MFSD13AQ14CX5 517 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 HMBOX1Q6NT76 420 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 CYP2R1Q6VVX0 501 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 VTCN1Q7Z7D3 282 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 MAPK1IP1LQ8NDC0 245 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 ADPRHL1Q8NDY3 354 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 ANKK1Q8NFD2 765 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 RNF217Q8TC41 542 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 SLC41A3Q96GZ6 507 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 NELFAQ9H3P2 528 aa17.8■□□□□ 0.44
TRIM8-203ENST00000479004 IGHV1-18A0A0C4DH31 117 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 ATP6V1G2-DDX39BF2Z307 99 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 MS4A18H0YCH9 400 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 ACOT8O14734 319 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 SSX4O60224 188 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 SLC43A1O75387 559 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 BGLAPP02818 100 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 HOXB1P14653 301 aaPredicted RBP17.79■□□□□ 0.44
TRIM8-203ENST00000479004 ATP6V1B2P21281 511 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 APOBEC3AP31941 199 aaPredicted RBP17.79■□□□□ 0.44
TRIM8-203ENST00000479004 CDH12P55289 794 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 SH3BGRP55822 239 aaPredicted RBP17.79■□□□□ 0.44
TRIM8-203ENST00000479004 UBE2NP61088 152 aaKnown RBP17.79■□□□□ 0.44
TRIM8-203ENST00000479004 C1DQ13901 141 aaKnown RBP17.79■□□□□ 0.44
TRIM8-203ENST00000479004 NPTX1Q15818 432 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 MS4A18Q3C1V0 323 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 ANKRD16Q6P6B7 361 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 OR4D11Q8NGI4 311 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 PYURFQ96I23 114 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 EPYCQ99645 322 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 POLR2J2Q9GZM3 115 aaKnown RBP17.79■□□□□ 0.44
TRIM8-203ENST00000479004 POLR2J3Q9H1A7 115 aaKnown RBP17.79■□□□□ 0.44
TRIM8-203ENST00000479004 CRNNQ9UBG3 495 aaPredicted RBP17.79■□□□□ 0.44
TRIM8-203ENST00000479004 MOKQ9UQ07 419 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 CORINQ9Y5Q5 1042 aa17.79■□□□□ 0.44
TRIM8-203ENST00000479004 CSPG4Q6UVK1 2322 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 INAFM1C9JVW0 142 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 TRAF3IP2O43734 574 aaPredicted RBP17.78■□□□□ 0.44
TRIM8-203ENST00000479004 IFNW1P05000 195 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 TNFRSF1BP20333 461 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 OR1E2P47887 323 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 SWT1Q5T5J6 900 aaKnown RBP17.78■□□□□ 0.44
TRIM8-203ENST00000479004 ZNF613Q6PF04 617 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 LINC00114Q6XXX2 140 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 RBM45Q8IUH3 476 aaKnown RBP17.78■□□□□ 0.44
TRIM8-203ENST00000479004 SCAIQ8N9R8 606 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 SLC38A2Q96QD8 506 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 TMEM43Q9BTV4 400 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 SLC7A8Q9UHI5 535 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 POMPQ9Y244 141 aa17.78■□□□□ 0.44
TRIM8-203ENST00000479004 TLN2Q9Y4G6 2542 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 A0A096LPE4 126 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 A0A1W2PPZ6 126 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 H7C417 338 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 AKAP8O43823 692 aaKnown RBP17.77■□□□□ 0.44
TRIM8-203ENST00000479004 HPRP00739 348 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 IFNA8P32881 189 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 TUBA1BP68363 451 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 TUBA4AP68366 448 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 ARF1P84077 181 aaKnown RBP17.77■□□□□ 0.44
TRIM8-203ENST00000479004 PPP2R2BQ00005 443 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 RAB35Q15286 201 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 C3orf36Q3SXR2 165 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 ENTPD8Q5MY95 495 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 NHLRC1Q6VVB1 395 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 DEF8Q6ZN54 512 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 TUBA1AQ71U36 451 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 UEVLDQ8IX04 471 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 PIK3C3Q8NEB9 887 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 OR2M2Q96R28 347 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 ASPNQ9BXN1 380 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 GPR35Q9HC97 309 aa17.77■□□□□ 0.44
TRIM8-203ENST00000479004 MRPL39Q9NYK5 338 aaKnown RBP17.77■□□□□ 0.44
TRIM8-203ENST00000479004 ALPK2Q86TB3 2170 aa17.77■□□□□ 0.43
TRIM8-203ENST00000479004 HIVEP2P31629 2446 aa17.76■□□□□ 0.43
TRIM8-203ENST00000479004 AQP12BA6NM10 295 aa17.76■□□□□ 0.43
TRIM8-203ENST00000479004 CPSF4LA6NMK7 179 aaKnown RBP17.76■□□□□ 0.43
TRIM8-203ENST00000479004 HLA-DOBP13765 273 aa17.76■□□□□ 0.43
TRIM8-203ENST00000479004 NQO1P15559 274 aaKnown RBP17.76■□□□□ 0.43
TRIM8-203ENST00000479004 NUDT6P53370 316 aa17.76■□□□□ 0.43
TRIM8-203ENST00000479004 IL1RL1Q01638 556 aa17.76■□□□□ 0.43
TRIM8-203ENST00000479004 FLOT2Q14254 428 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms