RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 ZNF672Q499Z4 452 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-206ENST00000478214 ANKRD16Q6P6B7 361 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 TUBA1AQ71U36 451 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 CYP4Z1Q86W10 505 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 NRMQ8IXM6 262 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 PIAS4Q8N2W9 510 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-206ENST00000478214 ZNF611Q8N823 705 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 OR6N1Q8NGY5 312 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 OR6X1Q8NH79 312 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 MOSPD2Q8NHP6 518 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 LIPHQ8WWY8 451 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 PIGTQ969N2 578 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 BPIFA2Q96DR5 249 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 LRR1Q96L50 414 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 NMNAT1Q9HAN9 279 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-206ENST00000478214 BEX4Q9NWD9 120 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-206ENST00000478214 NDUFAF4Q9P032 175 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 MAGED1Q9Y5V3 778 aaPredicted RBP13.63□□□□□ -0.23
HMGA1-206ENST00000478214 ITPR3Q14573 2671 aa13.63□□□□□ -0.23
HMGA1-206ENST00000478214 hCG_2039718K7EN88 272 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 DIRAS1O95057 198 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 BCL10O95999 233 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 WNT11O96014 354 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 TSPAN19P0C672 248 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 MAKP20794 623 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 CALB2P22676 271 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 UBE2NP61088 152 aaKnown RBP13.62□□□□□ -0.23
HMGA1-206ENST00000478214 VLDLRP98155 873 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 LAPTM4AQ15012 233 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 SPATS1Q496A3 300 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 C1QTNF12Q5T7M4 302 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 TBPL2Q6SJ96 375 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 ZNF730Q6ZMV8 503 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 RINLQ6ZS11 566 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 MAGEE2Q8TD90 523 aaPredicted RBP13.62□□□□□ -0.23
HMGA1-206ENST00000478214 BCAS4Q8TDM0 211 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 IGFBPL1Q8WX77 278 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 ACOT11Q8WXI4 607 aaPredicted RBP13.62□□□□□ -0.23
HMGA1-206ENST00000478214 PYURFQ96I23 114 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 ADAD1Q96M93 576 aaKnown RBP13.62□□□□□ -0.23
HMGA1-206ENST00000478214 NSMCE2Q96MF7 247 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 PIP5K1AQ99755 562 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 ULBP2Q9BZM5 246 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 OBP2BQ9NPH6 170 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 B3GAT2Q9NPZ5 323 aa13.62□□□□□ -0.23
HMGA1-206ENST00000478214 FAM32AQ9Y421 112 aaKnown RBP13.62□□□□□ -0.23
HMGA1-206ENST00000478214 TEP1Q99973 2627 aaKnown RBP13.61□□□□□ -0.23
HMGA1-206ENST00000478214 ARPC4-TTLL3A0A0A6YYG9 625 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 HTR3EA5X5Y0 456 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 ZNF99A8MXY4 864 aaPredicted RBP13.61□□□□□ -0.23
HMGA1-206ENST00000478214 H1F0P07305 194 aaKnown RBP13.61□□□□□ -0.23
HMGA1-206ENST00000478214 RHCEP18577 417 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 CDH11P55287 796 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 PRKCDQ05655 676 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 IQCCQ4KMZ1 466 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 SLC22A25Q6T423 547 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 MBOAT2Q6ZWT7 520 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 SLC7A13Q8TCU3 470 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 TMEM54Q969K7 222 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 FBXW5Q969U6 566 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 ZNF566Q969W8 418 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 SLC25A44Q96H78 314 aaPredicted RBP13.61□□□□□ -0.23
HMGA1-206ENST00000478214 INIPQ9NRY2 104 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 MGAT4BQ9UQ53 548 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 HIF3AQ9Y2N7 669 aa13.61□□□□□ -0.23
HMGA1-206ENST00000478214 RAI1Q7Z5J4 1906 aaPredicted RBP13.6□□□□□ -0.23
HMGA1-206ENST00000478214 A0A1W2PRG6 482 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 EFCAB9A8MZ26 197 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 MCIDASD6RGH6 385 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 SMPD2O60906 423 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 SEMG1P04279 462 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 DANCRP0C864 163 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 SAGP10523 405 aaPredicted RBP13.6□□□□□ -0.23
HMGA1-206ENST00000478214 HOXB1P14653 301 aaPredicted RBP13.6□□□□□ -0.23
HMGA1-206ENST00000478214 RUNX1T1Q06455 604 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 FGD3Q5JSP0 725 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 PODNL1Q6PEZ8 512 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 CYP2R1Q6VVX0 501 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 RNF113BQ8IZP6 322 aaKnown RBP13.6□□□□□ -0.23
HMGA1-206ENST00000478214 OR51A7Q8NH64 312 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 SMAP2Q8WU79 429 aaPredicted RBP13.6□□□□□ -0.23
HMGA1-206ENST00000478214 TMEM171Q8WVE6 324 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 RADILQ96JH8 1075 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 ANKRD19PQ9H560 264 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 CISD1Q9NZ45 108 aaKnown RBP13.6□□□□□ -0.23
HMGA1-206ENST00000478214 GLTPQ9NZD2 209 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 LAMP3Q9UQV4 416 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 POFUT2Q9Y2G5 429 aa13.6□□□□□ -0.23
HMGA1-206ENST00000478214 ZNF469Q96JG9 3925 aaPredicted RBP13.6□□□□□ -0.23
HMGA1-206ENST00000478214 DSCAMO60469 2012 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 TRAV27A0A087WT01 109 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 IGHV1-18A0A0C4DH31 117 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 A0A1W2PRQ8 180 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 ZNF503-AS2A6NEH8 195 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 E7EQL1 145 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 SOD3P08294 240 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 PGA4P0DJD7 388 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 PGA3P0DJD8 388 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 ATP6V1B2P21281 511 aa13.59□□□□□ -0.23
HMGA1-206ENST00000478214 GPR4P46093 362 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms