RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 MRPL39Q9NYK5 338 aaKnown RBP14.38□□□□□ -0.11
TRIM13-208ENST00000478111 PLPP3O14495 311 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 SYNGR3O43761 229 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 CD79AP11912 226 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 GPX2P18283 190 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 GLRXP35754 106 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 IDH3AP50213 366 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 CDH12P55289 794 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 PUDPQ08623 228 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 CAMK2DQ13557 499 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 SCARB2Q14108 478 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 FXNQ16595 210 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 LRP11Q86VZ4 500 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 CARM1Q86X55 608 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 KRT73Q86Y46 540 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 EPYCQ99645 322 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 EBF4Q9BQW3 602 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 TMEM43Q9BTV4 400 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 TMEM27Q9HBJ8 222 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 TCF7L2Q9NQB0 619 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 POFUT2Q9Y2G5 429 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 NOX1Q9Y5S8 564 aa14.37□□□□□ -0.11
TRIM13-208ENST00000478111 MFN2O95140 757 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 TGDSO95455 350 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 B4GALT1P15291 398 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 PPIBP23284 216 aaKnown RBP14.36□□□□□ -0.11
TRIM13-208ENST00000478111 COL8A2P25067 703 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 SEC24CP53992 1094 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 RGS8P57771 180 aaPredicted RBP14.36□□□□□ -0.11
TRIM13-208ENST00000478111 RAB1AP62820 205 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 PMS2P3Q13401 168 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 LIPNQ5VXI9 398 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 WDR88Q6ZMY6 472 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 PXKQ7Z7A4 578 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 ZNF584Q8IVC4 421 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 RFLNBQ8N5W9 214 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 FGFBP3Q8TAT2 258 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 RNF217Q8TC41 542 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 C7orf26Q96N11 449 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 FOXB1Q99853 325 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 ASPNQ9BXN1 380 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 RACGAP1Q9H0H5 632 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 CCDC167Q9P0B6 97 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 MYEF2Q9P2K5 600 aaKnown RBP14.36□□□□□ -0.11
TRIM13-208ENST00000478111 REV1Q9UBZ9 1251 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 WNK2Q9Y3S1 2297 aa14.36□□□□□ -0.11
TRIM13-208ENST00000478111 PRORSD1PA6NEY8 169 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 ZNF726A6NNF4 738 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 M0R233 179 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 POLR3GO15318 223 aaPredicted RBP14.35□□□□□ -0.11
TRIM13-208ENST00000478111 ZNF500O60304 480 aaPredicted RBP14.35□□□□□ -0.11
TRIM13-208ENST00000478111 LYPD3O95274 346 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 HPXP02790 462 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 SLC6A2P23975 617 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 AQP1P29972 269 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 GIPRP48546 466 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 PTDSS1P48651 473 aaKnown RBP14.35□□□□□ -0.11
TRIM13-208ENST00000478111 DVL1P1P54792 670 aaPredicted RBP14.35□□□□□ -0.11
TRIM13-208ENST00000478111 STX1BP61266 288 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 CCNIQ14094 377 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 SWT1Q5T5J6 900 aaKnown RBP14.35□□□□□ -0.11
TRIM13-208ENST00000478111 DLEU7Q6UYE1 221 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 SKA3Q8IX90 412 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 BHLHE22Q8NFJ8 381 aaPredicted RBP14.35□□□□□ -0.11
TRIM13-208ENST00000478111 OR6N1Q8NGY5 312 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 SYT3Q9BQG1 590 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 ULBP2Q9BZM5 246 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 MS4A5Q9H3V2 200 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 DENND2DQ9H6A0 471 aaPredicted RBP14.35□□□□□ -0.11
TRIM13-208ENST00000478111 SLCO1B3Q9NPD5 702 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 B3GAT2Q9NPZ5 323 aa14.35□□□□□ -0.11
TRIM13-208ENST00000478111 TCF21O43680 179 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 THY1P04216 161 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 PATE4P0C8F1 98 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 TCN1P20061 433 aaPredicted RBP14.34□□□□□ -0.11
TRIM13-208ENST00000478111 AHCYP23526 432 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 ALDH3B1P43353 468 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 PCBP3P57721 371 aaKnown RBP14.34□□□□□ -0.11
TRIM13-208ENST00000478111 NCALDP61601 193 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 RAB39AQ14964 217 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 MAD2L1BPQ15013 274 aaPredicted RBP14.34□□□□□ -0.11
TRIM13-208ENST00000478111 NPTX1Q15818 432 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 DUSP7Q16829 419 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 TRMT5Q32P41 509 aaKnown RBP14.34□□□□□ -0.11
TRIM13-208ENST00000478111 PTOV1Q86YD1 416 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 ARMC8Q8IUR7 673 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 SMYD1Q8NB12 490 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 HIPK4Q8NE63 616 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 OR5J2Q8NH18 312 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 TMEM54Q969K7 222 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 ZNF607Q96SK3 696 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 ARHGDIGQ99819 225 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 CPPED1Q9BRF8 314 aaPredicted RBP14.34□□□□□ -0.11
TRIM13-208ENST00000478111 CCDC28BQ9BUN5 200 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 SELENONQ9NZV5 590 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 SPEF1Q9Y4P9 236 aa14.34□□□□□ -0.11
TRIM13-208ENST00000478111 M0R3H8 397 aa14.33□□□□□ -0.12
TRIM13-208ENST00000478111 HAX1O00165 279 aa14.33□□□□□ -0.12
TRIM13-208ENST00000478111 WNT9BO14905 357 aa14.33□□□□□ -0.12
TRIM13-208ENST00000478111 FMO6PO60774 539 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms