RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ENPP6Q6UWR7 440 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 FRRS1Q6ZNA5 592 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 GPRIN3Q6ZVF9 776 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 TAS2R42Q7RTR8 314 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 ZNF550Q7Z398 422 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 AQP11Q8NBQ7 271 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 PAQR8Q8TEZ7 354 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 SMPDL3AQ92484 453 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 PIK3R3Q92569 461 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 SPSB1Q96BD6 273 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 FAM218AQ96MZ4 157 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 FOPNLQ96NB1 174 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 ZNF670Q9BS34 389 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 NTMT1Q9BV86 223 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 RSPO3Q9BXY4 272 aaPredicted RBP3.71□□□□□ -1.82
VPS50-214ENST00000477935 UGT2B28Q9BY64 529 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 RABEP2Q9H5N1 569 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 SPATA7Q9P0W8 599 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 KLHL21Q9UJP4 597 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 NAALAD2Q9Y3Q0 740 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 MMACHCQ9Y4U1 282 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 WIF1Q9Y5W5 379 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 RYR1P21817 5038 aa3.71□□□□□ -1.82
VPS50-214ENST00000477935 SNRNP200O75643 2136 aaKnown RBP3.7□□□□□ -1.82
VPS50-214ENST00000477935 IGHV3OR16-10A0A075B7F0 116 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 IGKV3D-11A0A0A0MRZ8 115 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 TRAV24A0A0B4J272 114 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 TRBV4-1A0A0J9YWV2 114 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 A0A1W2PPV9 198 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 H7C0S8 307 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 PSMD12O00232 456 aaPredicted RBP3.7□□□□□ -1.82
VPS50-214ENST00000477935 WWP2O00308 870 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 P2RX6O15547 441 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 EMC8O43402 210 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 CHST10O43529 356 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 CDH16O75309 829 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 RDH16O75452 317 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 SNX4O95219 450 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 C1orf105O95561 183 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 CD8AP01732 235 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 APOA4P06727 396 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 CCL3P10147 92 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 ACADSP16219 412 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 IL1RNP18510 177 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 PSMB5P28074 263 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 RPA3P35244 121 aaPredicted RBP3.7□□□□□ -1.82
VPS50-214ENST00000477935 DEKP35659 375 aaKnown RBP3.7□□□□□ -1.82
VPS50-214ENST00000477935 SLCO1A2P46721 670 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 EFNA4P52798 201 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 GBE1Q04446 702 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 HADHQ16836 314 aaKnown RBP3.7□□□□□ -1.82
VPS50-214ENST00000477935 PGGHGQ32M88 737 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 PIGGQ5H8A4 983 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 TCTEX1D4Q5JR98 221 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 KRT80Q6KB66 452 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 ZNF343Q6P1L6 599 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 BZW1Q7L1Q6 419 aaKnown RBP3.7□□□□□ -1.82
VPS50-214ENST00000477935 FCRLAQ7L513 359 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 SSX8Q7RTT4 187 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 GRAMD2AQ8IUY3 354 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 FAM219AQ8IW50 185 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 GCNT2Q8N0V5 402 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 FAM89BQ8N5H3 189 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 CNEP1R1Q8N9A8 125 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 SYT14Q8NB59 555 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 MORN4Q8NDC4 146 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 NCLNQ969V3 563 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 TM4SF19Q96DZ7 209 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 C2orf48Q96LS8 159 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 AGPAT1Q99943 283 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 DOHHQ9BU89 302 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 ACAT2Q9BWD1 397 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 CARD6Q9BX69 1037 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 SUCNR1Q9BXA5 334 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 FAM96AQ9H5X1 160 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 METTL17Q9H7H0 456 aaPredicted RBP3.7□□□□□ -1.82
VPS50-214ENST00000477935 CHCHD3Q9NX63 227 aaKnown RBP3.7□□□□□ -1.82
VPS50-214ENST00000477935 NDE1Q9NXR1 346 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 PCYOX1Q9UHG3 505 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 RWDD2AQ9UIY3 292 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 ZNF223Q9UK11 482 aaPredicted RBP3.7□□□□□ -1.82
VPS50-214ENST00000477935 PRDM4Q9UKN5 801 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 ARL5AQ9Y689 179 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 CLCA3PQ9Y6N3 262 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 EML6Q6ZMW3 1958 aa3.7□□□□□ -1.82
VPS50-214ENST00000477935 YLPM1P49750 1951 aaKnown RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 IGKV1-8A0A0C4DH67 115 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 LOC100653049A0A140TA62 436 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 A8MUA0 341 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 H7C417 338 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 GFYI3L273 518 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 CDC7O00311 574 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 CLOCKO15516 846 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 GALR3O60755 368 aaPredicted RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 TRIM3O75382 744 aaPredicted RBP3.69□□□□□ -1.82
VPS50-214ENST00000477935 KRT34O76011 436 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 SLC35G6P0C7Q6 338 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 ERGP11308 486 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 GZMAP12544 262 aa3.69□□□□□ -1.82
VPS50-214ENST00000477935 TCF4P15884 667 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms