RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CLEC6AQ6EIG7 209 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 TYW3Q6IPR3 259 aaKnown RBP6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 C6orf89Q6UWU4 347 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 BTNL3Q6UXE8 466 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 LRRC8AQ8IWT6 810 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 C1orf174Q8IYL3 243 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 KDM8Q8N371 416 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 GPR137CQ8N3F9 429 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 PAQR4Q8N4S7 273 aaPredicted RBP6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 ARFGAP2Q8N6H7 521 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 TBC1D15Q8TC07 691 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 OIT3Q8WWZ8 545 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 RAB40AQ8WXH6 277 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 C11orf40Q8WZ69 217 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 CFHR4Q92496 578 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 FCRL1Q96LA6 429 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 TSSK3Q96PN8 268 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 DCLRE1CQ96SD1 692 aaKnown RBP6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 CCT7Q99832 543 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 OR5V1Q9UGF6 321 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 BAIAP2L1Q9UHR4 511 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 DNAH1Q9P2D7 4330 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 PLXNB1O43157 2135 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 IGHV2-70DA0A0C4DH43 119 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 DUXAA6NLW8 204 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 FAAHO00519 579 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 SPRY3O43610 288 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 NPIPB7O75200 414 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 IGHV4-59P01825 116 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 MT-ND5P03915 603 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 ADH4P08319 380 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 WNT2P09544 360 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 UROSP10746 265 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF43P17038 809 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 SDC1P18827 310 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 MAGEA4P43358 317 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF81P51508 661 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 DBPQ10586 325 aaPredicted RBP6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 HERPUD1Q15011 391 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 ESCO2Q56NI9 601 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 DEFB121Q5J5C9 76 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 TMEM255AQ5JRV8 349 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF774Q6NX45 483 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF813Q6ZN06 617 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 RNF130Q86XS8 419 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 TMEM123Q8N131 208 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 PIK3C3Q8NEB9 887 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 OR5P2Q8WZ92 322 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 CNOT9Q92600 299 aaKnown RBP6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 MTERF3Q96E29 417 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 MARS2Q96GW9 593 aaKnown RBP6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 OR2M2Q96R28 347 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 B9D2Q9BPU9 175 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 TAPBPLQ9BX59 468 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 RRAGDQ9NQL2 400 aaPredicted RBP6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 B3GAT1Q9P2W7 334 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 ATP6V1HQ9UI12 483 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 FBXL3Q9UKT7 428 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 SNX12Q9UMY4 172 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 STK38LQ9Y2H1 464 aa6.11□□□□□ -1.43
SPTLC1-205ENST00000477888 ZSCAN5BA6NJL1 495 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 A8MVM7 634 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 FTCDNL1E5RQL4 147 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 M0R3G1 203 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 MFN2O95140 757 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 TGDSO95455 350 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 RAB36O95755 333 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 LCKP06239 509 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 TFPTP0C1Z6 253 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 PATE4P0C8F1 98 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 LAMP1P11279 417 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 CCL2P13500 99 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 B4GALT1P15291 398 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 MATN1P21941 496 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 CXCR1P25024 350 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 LSP1P33241 339 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 PRKAA2P54646 552 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 UCP2P55851 309 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 BTG1P62324 171 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 GLO1Q04760 184 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 CD69Q07108 199 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 RBBP4Q09028 425 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 BST1Q10588 318 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 BNIP2Q12982 314 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 CAMK2DQ13557 499 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 MFSD13AQ14CX5 517 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 LARS2Q15031 903 aaKnown RBP6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 ZMYND11Q15326 602 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 UAP1Q16222 522 aaPredicted RBP6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 GSTA3Q16772 222 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 C21orf62-AS1Q17RA5 79 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 SPDYE7PQ495Y7 208 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 RFTN2Q52LD8 501 aaPredicted RBP6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 GPR157Q5UAW9 335 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 GDPGP1Q6ZNW5 385 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 Q6ZTK2 550 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 HMGN2P46Q86SG4 172 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 C20orf196Q8IYI0 205 aa6.1□□□□□ -1.43
SPTLC1-205ENST00000477888 SPC24Q8NBT2 197 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms