RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 OR6K6Q8NGW6 343 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 NEIL3Q8TAT5 605 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 CT55Q8WUE5 264 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 KIAA1143Q96AT1 154 aaPredicted RBP7.16□□□□□ -1.26
VMA21-203ENST00000477649 SLC25A36Q96CQ1 311 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 RASD2Q96D21 266 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 FAM122AQ96E09 287 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 SMIM19Q96E16 107 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 ZMYND19Q96E35 227 aaPredicted RBP7.16□□□□□ -1.26
VMA21-203ENST00000477649 TSPAN32Q96QS1 320 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 INTS14Q96SY0 518 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 TIMP4Q99727 224 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 MRI1Q9BV20 369 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 WDR76Q9H967 626 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 AKIRIN1Q9H9L7 192 aaPredicted RBP7.16□□□□□ -1.26
VMA21-203ENST00000477649 SMURF1Q9HCE7 757 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 ZNF160Q9HCG1 818 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 SH2D2AQ9NP31 389 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 CHST11Q9NPF2 352 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 RPRD1BQ9NQG5 326 aaKnown RBP7.16□□□□□ -1.26
VMA21-203ENST00000477649 MED11Q9P086 117 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 ABI3Q9P2A4 366 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 NCDNQ9UBB6 729 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 RABL2AQ9UBK7 228 aaPredicted RBP7.16□□□□□ -1.26
VMA21-203ENST00000477649 RABL2BQ9UNT1 228 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 R4GN57 208 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 PIEZO1Q92508 2521 aa7.16□□□□□ -1.26
VMA21-203ENST00000477649 FER1L5A0AVI2 2057 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 TRAV1-2A0A0B4J238 106 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 ZC3H12DA2A288 527 aaKnown RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 ZNF879B4DU55 563 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 NPIPA5E9PKD4 350 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 CASKO14936 926 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 ARHGEF9O43307 516 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 TLX3O43711 291 aaPredicted RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 TMCC2O75069 709 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 VAMP5O95183 116 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 PMS2P2O95744 297 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 HRGP04196 525 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 P04436 131 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 KRT8P05787 483 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 MRPL3P09001 348 aaKnown RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 TFPIP10646 304 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 CLUP10909 449 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 BMP4P12644 408 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 AHCYP23526 432 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 MAPK3P27361 379 aaPredicted RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 PYCR1P32322 319 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 SDC2P34741 201 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 ACVR1BP36896 505 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 DEFA1P59665 94 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 DEFA3P59666 94 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 GPR85P60893 370 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 PPP3R1P63098 170 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 TLE3Q04726 772 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 GLO1Q04760 184 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 DNASE1L3Q13609 305 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 CDK5R1Q15078 307 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 YIF1BQ5BJH7 314 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 TEX30Q5JUR7 227 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 TIGD3Q6B0B8 471 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 SLC18B1Q6NT16 456 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 FDX2Q6P4F2 183 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 KCTD18Q6PI47 426 aaPredicted RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 POMZP3Q6PJE2 187 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 DEGS2Q6QHC5 323 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 C16orf47Q6ZP98 133 aaPredicted RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 PIP4P1Q86T03 277 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 CCDC190Q86UF4 302 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 CDC20BQ86Y33 519 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 MARCH9Q86YJ5 346 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 TIGD4Q8IY51 512 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 ZNF417Q8TAU3 575 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 ABHD4Q8TB40 342 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 RPS4Y2Q8TD47 263 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 CHPT1Q8WUD6 406 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 TMEM203Q969S6 136 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 ZNF524Q96C55 264 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 FER1L6-AS2Q96M78 137 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 ADAD1Q96M93 576 aaKnown RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 ZNF587Q96SQ5 575 aaPredicted RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 SLC30A2Q9BRI3 323 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 TTYH2Q9BSA4 534 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 LRFN3Q9BTN0 628 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 CDCP1Q9H5V8 836 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 ISG20L2Q9H9L3 353 aaKnown RBP7.15□□□□□ -1.26
VMA21-203ENST00000477649 GALNT9Q9HCQ5 603 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 SNTG1Q9NSN8 517 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 ST6GALNAC2Q9UJ37 374 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 KCNG2Q9UJ96 466 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 LAMP5Q9UJQ1 280 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 NPIPA1Q9UND3 350 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 CMAHPQ9Y471 501 aa7.15□□□□□ -1.26
VMA21-203ENST00000477649 CFAP54Q96N23 3096 aa7.15□□□□□ -1.27
VMA21-203ENST00000477649 SDK1Q7Z5N4 2213 aa7.15□□□□□ -1.27
VMA21-203ENST00000477649 SLC22A23A1A5C7 686 aa7.14□□□□□ -1.27
VMA21-203ENST00000477649 C9orf172C9J069 976 aa7.14□□□□□ -1.27
VMA21-203ENST00000477649 STMND1H3BQB6 276 aa7.14□□□□□ -1.27
VMA21-203ENST00000477649 PDCD5O14737 125 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms