RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 CAMK2AQ9UQM7 478 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 PCDHB11Q9Y5F2 797 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 FLVCR1Q9Y5Y0 555 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 SHISA3A0PJX4 238 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 OR52A4PA6NMU1 304 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 PHOX2AO14813 284 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 GLCEO94923 617 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 ZFPL1O95159 310 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 CTSLP07711 333 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 ELFN1P0C7U0 828 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 PBX2P40425 430 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 GSK3AP49840 483 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 SPANXN4Q5MJ08 99 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 HIST2H3AQ71DI3 136 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 CXXC5Q7LFL8 322 aaKnown RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 HSD11B1LQ7Z5J1 315 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 NRSN1Q8IZ57 195 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 FAM185AQ8N0U4 392 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 ACBD4Q8NC06 268 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 OR51Q1Q8NH59 317 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 GALNT14Q96FL9 552 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 TPD52L3Q96J77 140 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 HRASLSQ9HDD0 168 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 TMEM184CQ9NVA4 438 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 MRPS18AQ9NVS2 196 aaKnown RBP11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 ASIC5Q9NY37 505 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 PRODH2Q9UF12 536 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 CD84Q9UIB8 345 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 FZD4Q9ULV1 537 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 C2orf16Q68DN1 1984 aa11.61□□□□□ -0.55
RTFDC1-207ENST00000477573 PLXNB3Q9ULL4 1909 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 FAM171A2A8MVW0 826 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 PCDH8O95206 1070 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 TYRP1P17643 537 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 RAB1AP62820 205 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 B4GALNT1Q00973 533 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 GTF2H2Q13888 395 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 HNRNPA1L2Q32P51 320 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 ACTBL2Q562R1 376 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 PLEKHS1Q5SXH7 462 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 OLFML2AQ68BL7 652 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 LEMD1Q68G75 181 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 GTF2H2CQ6P1K8 395 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 TSSK4Q6SA08 328 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 RFLNAQ6ZTI6 216 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 Q6ZVL8 140 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF551Q7Z340 670 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 FOXRED2Q8IWF2 684 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 YAF2Q8IY57 180 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 OR2AK2Q8NG84 335 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 RNASEH2CQ8TDP1 164 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 DUSP19Q8WTR2 217 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 PPP1R16AQ96I34 528 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF514Q96K75 400 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 ADGRG7Q96K78 797 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 NRSN2Q9GZP1 204 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 NKX2-4Q9H2Z4 354 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 IGFLR1Q9H665 355 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 FGF20Q9NP95 211 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 CHST11Q9NPF2 352 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 DNAJC27Q9NZQ0 273 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 EXOSC1Q9Y3B2 195 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 TMEM269A0A1B0GVZ9 245 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 SMCO3A2RU48 225 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 RNF222A6NCQ9 220 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 C9J4A7 227 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 RFXANKO14593 260 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 AOAHP28039 575 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 OR3A1P47881 315 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 MVDP53602 400 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 STXBP1P61764 594 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 ELAVL3Q14576 367 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 RHEBQ15382 184 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 HENMT1Q5T8I9 393 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 C18orf63Q68DL7 685 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 UBE2R2Q712K3 238 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 NUP54Q7Z3B4 507 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 BAP18Q8IXM2 172 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 OR7G2Q8NG99 324 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 SCAMP4Q969E2 229 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 BOD1Q96IK1 185 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 OR1F2PQ96R84 312 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 IL4I1Q96RQ9 567 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 DOHHQ9BU89 302 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 SF3B5Q9BWJ5 86 aaKnown RBP11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 PCED1AQ9H1Q7 454 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 TRPC4Q9UBN4 977 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF225Q9UK10 706 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 V9GYS6 101 aa11.6□□□□□ -0.55
RTFDC1-207ENST00000477573 CEP290O15078 2479 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 C7orf77A4D0Y5 90 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 RNASEK-C17orf49H0YIS7 233 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 HYAL3O43820 417 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 GMFGO60234 142 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 CD5P06127 495 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 MPC1LP0DKB6 136 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 SLC25A4P12235 298 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 ETFAP13804 333 aa11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 APOBEC3AP31941 199 aaPredicted RBP11.59□□□□□ -0.55
RTFDC1-207ENST00000477573 SLC6A11P48066 632 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms