RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	PLBD1	Q6P4A8	553 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	CERS6	Q6ZMG9	384 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	DNM1P46	Q6ZS02	220 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF621	Q6ZSS3	439 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520		Q6ZTK2	550 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC35D2	Q76EJ3	337 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	SSX6	Q7RTT6	188 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC16A14	Q7RTX9	510 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC36A1	Q7Z2H8	476 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	GOLGA7	Q7Z5G4	137 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	NRROS	Q86YC3	692 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZFP82	Q8N141	532 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	GPR137C	Q8N3F9	429 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	D2HGDH	Q8N465	521 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	ARL14	Q8N4G2	192 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	ACBD7	Q8N6N7	88 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	TCEANC	Q8N8B7	351 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	UBAC2	Q8NBM4	344 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	HJURP	Q8NCD3	748 aa	Predicted RBP	4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR7G2	Q8NG99	324 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR1S2	Q8NGQ3	325 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR6N1	Q8NGY5	312 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	EEF1AKMT1	Q8WVE0	214 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	THRSP	Q92748	146 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	CORO2A	Q92828	525 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	EXT2	Q93063	718 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	OTUB2	Q96DC9	234 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	CMBL	Q96DG6	245 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	S100A16	Q96FQ6	103 aa	Known RBP	4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	CASD1	Q96PB1	797 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	IL4I1	Q96RQ9	567 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	STAC	Q99469	402 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	ALG8	Q9BVK2	526 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	CHST8	Q9H2A9	424 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	C1orf198	Q9H425	327 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	CDCP1	Q9H5V8	836 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	PTGES2	Q9H7Z7	377 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	IPPK	Q9H8X2	491 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM27	Q9HBJ8	222 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	UBQLN4	Q9NRR5	601 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	CUTC	Q9NTM9	273 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	SEMA4G	Q9NTN9	838 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	TMEM161A	Q9NX61	479 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	TAS2R16	Q9NYV7	291 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	TAS2R10	Q9NYW0	307 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	NLGN3	Q9NZ94	848 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	NCDN	Q9UBB6	729 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	SLC2A6	Q9UGQ3	507 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	OARD1	Q9Y530	152 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	ETV7	Q9Y603	341 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	MKI67	P46013	3256 aa	Known RBP	4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	DENND4A	Q7Z401	1863 aa		4.3	□□□□□ -1.72
PTCD3-212	ENST00000477520	BRCA2	P51587	3418 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520		A0A087WWC5	75 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TBC1D3B	A6NDS4	549 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	NCF1B	A6NI72	391 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR52A4P	A6NMU1	304 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR2AT4	A6NND4	320 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520		F5H423	210 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520		H0YIV9	168 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520		H3BN98	237 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR7A17	O14581	309 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ARPC1B	O15143	372 aa	Known RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	SURF4	O15260	269 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MAGEB4	O15481	346 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	LDB2	O43679	373 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	KDELR3	O43731	214 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TLX2	O43763	284 aa	Predicted RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	LANCL1	O43813	399 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	OR1I1	O60431	355 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CBR3	O75828	277 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	DIRAS1	O95057	198 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CLDN9	O95484	217 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	GAST	P01350	101 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MT-ND5	P03915	603 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CD74	P04233	296 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	HLA-DQB2	P05538	268 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CD5	P06127	495 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	H1F0	P07305	194 aa	Known RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ANXA2	P07355	339 aa	Known RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CD3G	P09693	182 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ALPI	P09923	528 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	LIMS3	P0CW19	117 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	LIMS4	P0CW20	117 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CALCB	P10092	127 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ZNF35	P13682	527 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	NQO2	P16083	231 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	ADCYAP1	P18509	176 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	CEL	P19835	753 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	MAOA	P21397	527 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	GABRR2	P28476	465 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	HTR1F	P30939	366 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	IGFALS	P35858	605 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	RPL4	P36578	427 aa	Known RBP	4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	TNFSF9	P41273	254 aa		4.29	□□□□□ -1.72
PTCD3-212	ENST00000477520	PTGER3	P43115	390 aa		4.29	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms