RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 MID2Q9UJV3 735 aa8.29□□□□□ -1.08
COL4A5-204ENST00000477429 A0A0G2JMP0 313 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 A0A0X1KG70 313 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 A0A1W2PPW3 197 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 LRRN3E7EW58 273 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 TRAPPC2LH3BP13 241 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 ZNF43P17038 809 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 MAKP20794 623 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 PRTN3P24158 256 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 GRPRP30550 384 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 CHI3L1P36222 383 aaPredicted RBP8.28□□□□□ -1.08
COL4A5-204ENST00000477429 MAP2K6P52564 334 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 SEC61A1P61619 476 aaKnown RBP8.28□□□□□ -1.08
COL4A5-204ENST00000477429 UFM1P61960 85 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 GLO1Q04760 184 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 GTDC1Q4AE62 458 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 LEG1Q6P5S2 330 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 ZNF813Q6ZN06 617 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 USP51Q70EK9 711 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 DOK3Q7L591 496 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 ZNF627Q7L945 461 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 SKA3Q8IX90 412 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 GPR137CQ8N3F9 429 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 OR4M2Q8NGB6 313 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 C16orf45Q96MC5 204 aaPredicted RBP8.28□□□□□ -1.08
COL4A5-204ENST00000477429 CCDC115Q96NT0 180 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 OXGR1Q96P68 337 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 WFDC6Q9BQY6 131 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 ZNF416Q9BWM5 594 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 MTHFD2LQ9H903 347 aaPredicted RBP8.28□□□□□ -1.08
COL4A5-204ENST00000477429 SLC52A3Q9NQ40 469 aa8.28□□□□□ -1.08
COL4A5-204ENST00000477429 DDX28Q9NUL7 540 aaKnown RBP8.28□□□□□ -1.08
COL4A5-204ENST00000477429 NOP53Q9NZM5 478 aaKnown RBP8.28□□□□□ -1.08
COL4A5-204ENST00000477429 LEF1Q9UJU2 399 aaPredicted RBP8.28□□□□□ -1.08
COL4A5-204ENST00000477429 ZNF443Q9Y2A4 671 aaPredicted RBP8.28□□□□□ -1.08
COL4A5-204ENST00000477429 IGLV3-9A0A075B6K5 115 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 IGHV3OR16-10A0A075B7F0 116 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 IGHV1-69-2A0A0G2JMI3 117 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 MDFIC2A0A1B0GVS7 189 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 CCDC154A6NI56 674 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 C17orf100A8MU93 164 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 VSTM5A8MXK1 200 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 AHSA1O95433 338 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 DBIP07108 87 aaKnown RBP8.27□□□□□ -1.09
COL4A5-204ENST00000477429 ALDOCP09972 364 aaKnown RBP8.27□□□□□ -1.09
COL4A5-204ENST00000477429 NR2F1P10589 423 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 ETFAP13804 333 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 PAX7P23759 505 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 HTR2AP28223 471 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 CRYBB2P43320 205 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 RAB1AP62820 205 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 HPCAP84074 193 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 SCGB2A2Q13296 93 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 SLC9A3R2Q15599 337 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 TSTQ16762 297 aaKnown RBP8.27□□□□□ -1.09
COL4A5-204ENST00000477429 TRMT5Q32P41 509 aaKnown RBP8.27□□□□□ -1.09
COL4A5-204ENST00000477429 GLIPR1L2Q4G1C9 344 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 GKAP1Q5VSY0 366 aaPredicted RBP8.27□□□□□ -1.09
COL4A5-204ENST00000477429 RHOUQ7L0Q8 258 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 C1QL4Q86Z23 238 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 ZNF781Q8N8C0 355 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 IL17RDQ8NFM7 739 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 STK35Q8TDR2 534 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 TESCQ96BS2 214 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 APOPT1Q96IL0 206 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 RHOXF2Q9BQY4 288 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 DPY30Q9C005 99 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 ZNF385DQ9H6B1 395 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 HINT3Q9NQE9 182 aaKnown RBP8.27□□□□□ -1.09
COL4A5-204ENST00000477429 MKS1Q9NXB0 559 aa8.27□□□□□ -1.09
COL4A5-204ENST00000477429 J3QLI3 93 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 BCHEP06276 602 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 CAMK2DQ13557 499 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 C1DQ13901 141 aaKnown RBP8.26□□□□□ -1.09
COL4A5-204ENST00000477429 NKPD1Q17RQ9 610 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 LIN52Q52LA3 116 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 FBLN7Q53RD9 439 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 PIK3C3Q8NEB9 887 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 TCP10LQ8TDR4 215 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 SLC38A5Q8WUX1 472 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 VPS33AQ96AX1 596 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 PKNOX2Q96KN3 472 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 MOGAT1Q96PD6 335 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 SH3GL3Q99963 347 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 MOV10Q9HCE1 1003 aaKnown RBP8.26□□□□□ -1.09
COL4A5-204ENST00000477429 NPHS2Q9NP85 383 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 KLHL14Q9P2G3 628 aa8.26□□□□□ -1.09
COL4A5-204ENST00000477429 E9PBE3 544 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 BGLAPP02818 100 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 BPGMP07738 259 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 RNASE1P07998 156 aaKnown RBP8.25□□□□□ -1.09
COL4A5-204ENST00000477429 OR8G3PP0DMU2 310 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 IGHV4-38-2P0DP08 117 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 ZNF250P15622 560 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 NCF2P19878 526 aaPredicted RBP8.25□□□□□ -1.09
COL4A5-204ENST00000477429 S100A3P33764 101 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 MPV17P39210 176 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 RELBQ01201 579 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 BAMBIQ13145 260 aa8.25□□□□□ -1.09
COL4A5-204ENST00000477429 C11orf91Q3C1V1 193 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms