RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 CENPVQ7Z7K6 275 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 ISCA2Q86U28 154 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ZNF546Q86UE3 836 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 KCNMB4Q86W47 210 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 KRTAP11-1Q8IUC1 163 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FAM219AQ8IW50 185 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 NRMQ8IXM6 262 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SVOPLQ8N434 492 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 STX19Q8N4C7 294 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CERS5Q8N5B7 392 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ARRDC1Q8N5I2 433 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 TMEM178AQ8NBL3 297 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FBXO36Q8NEA4 188 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PROKR2Q8NFJ6 384 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PXT1Q8NFP0 134 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 TSPAN14Q8NG11 270 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 OR51D1Q8NGF3 324 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 OR13C5Q8NGS8 318 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 OR9A4Q8NGU2 314 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 OR51A7Q8NH64 312 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 WDR36Q8NI36 951 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 NUBPLQ8TB37 319 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ZPLD1Q8TCW7 415 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 AENQ8WTP8 325 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 C16orf78Q8WTQ4 265 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SMARCD2Q92925 531 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 TMEM45BQ96B21 275 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PPWD1Q96BP3 646 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 BIRC7Q96CA5 298 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 NXNL1Q96CM4 212 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 HARBI1Q96MB7 349 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SFXN2Q96NB2 322 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 OR2A14Q96R47 310 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 RAB40CQ96S21 281 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PFDN5Q99471 154 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PRMT1Q99873 361 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 SOSTQ9BQB4 213 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SLC35A5Q9BS91 424 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 H2AFJQ9BTM1 129 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FUCA2Q9BTY2 467 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 MED18Q9BUE0 208 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ZNF426Q9BUY5 554 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 KATNB1Q9BVA0 655 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ST6GALNAC5Q9BVH7 336 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 MND1Q9BWT6 205 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ROGDIQ9GZN7 287 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SIRPDQ9H106 197 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 WDR76Q9H967 626 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 GPN2Q9H9Y4 310 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 LMAN1LQ9HAT1 526 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 UGT1A10Q9HAW8 530 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 UGT1A8Q9HAW9 530 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SGK2Q9HBY8 427 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ABCB9Q9NP78 766 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FAM207AQ9NSI2 230 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 PIGVQ9NUD9 493 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 LYARQ9NX58 379 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 IMPAD1Q9NX62 359 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 USE1Q9NZ43 259 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PTTG3PQ9NZH4 202 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 TMEM9Q9P0T7 183 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 RHCGQ9UBD6 479 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SEC14L3Q9UDX4 400 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 MLXQ9UH92 298 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 GLS2Q9UI32 602 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PHF11Q9UIL8 331 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FBXW11Q9UKB1 542 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ELF5Q9UKW6 265 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 RARRES3Q9UL19 164 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ZNF490Q9ULM2 529 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 MOKQ9UQ07 419 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PPP1R3CQ9UQK1 317 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 POLR3HQ9Y535 204 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 TSSC4Q9Y5U2 329 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 KPTNQ9Y664 436 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 YLPM1P49750 1951 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 ARHGEF11O15085 1522 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 DISP1Q96F81 1524 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CD109Q6YHK3 1445 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ADAMTS12P58397 1594 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CEP164Q9UPV0 1460 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 ARHGEF40Q8TER5 1519 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 IGHV4-4A0A075B6R2 117 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 A0A0U1RRA0 63 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 FEZF1A0PJY2 475 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 NKX6-3A6NJ46 265 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 CCT8L1PA6NM43 557 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 A8MUA0 341 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 A8MUI8 341 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 LEUTXA8MZ59 168 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 KLLNB2CW77 178 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 C9J4A7 227 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 C9JVG2 144 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 G3V2T6 193 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 H0YIG0 161 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 H3BMM5 538 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 M0QXV9 152 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 PSMD12O00232 456 aaPredicted RBP2.14□□□□□ -2.07
XRN1-211ENST00000477237 PDHXO00330 501 aa2.14□□□□□ -2.07
XRN1-211ENST00000477237 KPNA4O00629 521 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms