RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SBK2P0C263 348 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 CDK2P24941 298 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 EVX1P49640 407 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 COL19A1Q14993 1142 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 SF3A2Q15428 464 aaKnown RBP4.57□□□□□ -1.68
CCDC39-204ENST00000476379 ST3GAL2Q16842 350 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 EIPR1Q53HC9 387 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 METRNLQ641Q3 311 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 SLC25A24Q6NUK1 477 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM205Q6UW68 189 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 KIRREL2Q6UWL6 708 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF704Q6ZNC4 412 aaPredicted RBP4.57□□□□□ -1.68
CCDC39-204ENST00000476379 DGAT2L6Q6ZPD8 337 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 MBOAT2Q6ZWT7 520 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 MED25Q71SY5 747 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF321PQ8N8H1 164 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 OR5T1Q8NG75 326 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 OR5T2Q8NGG2 359 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 NUDCD2Q8WVJ2 157 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 NXPE2Q96DL1 559 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 WDR92Q96MX6 357 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 ALG12Q9BV10 488 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 C1QTNF2Q9BXJ5 285 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 CDCA4Q9BXL8 241 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 PINK1Q9BXM7 581 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 FAM117AQ9C073 453 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF768Q9H5H4 540 aaKnown RBP4.57□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM38AQ9H6F2 299 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 GPN1Q9HCN4 374 aaPredicted RBP4.57□□□□□ -1.68
CCDC39-204ENST00000476379 DIABLOQ9NR28 239 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 EPHA6Q9UF33 1036 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 SHPKQ9UHJ6 478 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 KCNG2Q9UJ96 466 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 ACSL5Q9ULC5 683 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 RHBDD3Q9Y3P4 386 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 RBM7Q9Y580 266 aaKnown RBP4.57□□□□□ -1.68
CCDC39-204ENST00000476379 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.57□□□□□ -1.68
CCDC39-204ENST00000476379 PLXND1Q9Y4D7 1925 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 PLXNA3P51805 1871 aa4.57□□□□□ -1.68
CCDC39-204ENST00000476379 DISC1C4P0D8 188 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 M0R036 132 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TACR3P29371 465 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 AGFG1P52594 562 aaKnown RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 EPHA4P54764 986 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 RAB15P59190 212 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CAMK2DQ13557 499 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 RBM39Q14498 530 aaKnown RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 NDUFA9Q16795 377 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 COL28A1Q2UY09 1125 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 LINC00303Q3SY05 128 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CDKL4Q5MAI5 379 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 PHF19Q5T6S3 580 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 P4HA3Q7Z4N8 544 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM200AQ86VY9 491 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 GLB1L2Q8IW92 636 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF680Q8NEM1 530 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 SEMA6DQ8NFY4 1073 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 UBALD1Q8TB05 177 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CXorf58Q96LI9 332 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TSNAXQ99598 290 aaKnown RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TMEM43Q9BTV4 400 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 SGPP1Q9BX95 441 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TINAGL1Q9GZM7 467 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 C20orf85Q9H1P6 137 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CHST11Q9NPF2 352 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 FLRT3Q9NZU0 649 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CPNE7Q9UBL6 633 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 RALYQ9UKM9 306 aaKnown RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CBLCQ9ULV8 474 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 EMC9Q9Y3B6 208 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 C2orf16Q68DN1 1984 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 IGKV1-8A0A0C4DH67 115 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 FOXE1O00358 373 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 P2RY10O00398 339 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 SURF4O15260 269 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 EIF3GO75821 320 aaKnown RBP eCLIP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 NDUFB2O95178 105 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 SOD1P00441 154 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 RENP00797 406 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 PDGFAP04085 211 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CD2P06729 351 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 DRD2P14416 443 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 HTR2AP28223 471 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 NTSR1P30989 418 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 OR3A2P47893 321 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 GZMKP49863 264 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 TPMTP51580 245 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 LUMP51884 338 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 ART1P52961 327 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 CXADRP78310 365 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 SIRPAP78324 504 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 POU3F1Q03052 451 aaPredicted RBP4.56□□□□□ -1.68
CCDC39-204ENST00000476379 LTBQ06643 244 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 FMODQ06828 376 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 ZNF616Q08AN1 781 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 PLCXD2Q0VAA5 305 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 PDE7AQ13946 482 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 C21orf62-AS1Q17RA5 79 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 GAB4Q2WGN9 574 aa4.56□□□□□ -1.68
CCDC39-204ENST00000476379 LAS2Q8IYD9 372 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms