RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 KCNE3Q9Y6H6 103 aa4.68□□□□□ -1.66
SSR3-206ENST00000476217 ASCC3Q8N3C0 2202 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 TRBV11-1A0A0K0K1C0 115 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 C2orf92A0A1B0GVN3 265 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 A0A1W2PS18 150 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 SAGE2PA6NJ88 616 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 VSTM2BA6NLU5 285 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 OR6C76A6NM76 312 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 F5H0A9 414 aaPredicted RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 CLOCKO15516 846 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 SPINT2O43291 252 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 E2F6O75461 281 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 GCM2O75603 506 aaPredicted RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 SLC25A12O75746 678 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 NKX2-2O95096 273 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 MFN2O95140 757 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 CST1P01037 141 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 IFNW1P05000 195 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 CEACAM1P13688 526 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 ETS2P15036 469 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 ITGA2P17301 1181 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 TCN2P20062 427 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 S1PR1P21453 382 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 RBMS1P29558 406 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 VHLP40337 213 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 EMDP50402 254 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 EFNA3P52797 238 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 RPS15P62841 145 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 SELENOWP63302 87 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 ATP6AP1Q15904 470 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 COL28A1Q2UY09 1125 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 EIF2S3LQ2VIR3 472 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 EIPR1Q53HC9 387 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 ZNF311Q5JNZ3 666 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 DCST1Q5T197 706 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 IRAK1BP1Q5VVH5 260 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 PRAMEF8Q5VWM4 474 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 PRAMEF7Q5VXH5 474 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 LPCAT4Q643R3 524 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 PAPD4Q6PIY7 484 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 OLIG3Q7RTU3 272 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 CPEB2Q7Z5Q1 589 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 HMGN2P46Q86SG4 172 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 PEX5LQ8IYB4 626 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 ZNF619Q8N2I2 560 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 ZNF614Q8N883 585 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 ZNF321PQ8N8H1 164 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 ZNF615Q8N8J6 731 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 POC1AQ8NBT0 407 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 PAPD5Q8NDF8 572 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 CHDHQ8NE62 594 aaPredicted RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 PLPP5Q8NEB5 264 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 CATSPER1Q8NEC5 780 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 B3GNT7Q8NFL0 401 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 OR2Y1Q8NGV0 311 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 VANGL1Q8TAA9 524 aaPredicted RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 ZNF721Q8TF20 911 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 CT55Q8WUE5 264 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 C8orf44Q96CB5 159 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 RRNAD1Q96FB5 475 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 VSTM2LQ96N03 204 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 BTBD9Q96Q07 612 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 LPAR4Q99677 370 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 LMF2Q9BU23 707 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 NUDT9Q9BW91 350 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 WWTR1Q9GZV5 400 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 ZNF350Q9GZX5 532 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 SLC38A1Q9H2H9 487 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 AKIRIN1Q9H9L7 192 aaPredicted RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 BCL2L10Q9HD36 194 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 POLE3Q9NRF9 147 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 AGPAT4Q9NRZ5 378 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 KLHL28Q9NXS3 571 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 MRTO4Q9UKD2 239 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 MKLN1Q9UL63 735 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 SLC9A8Q9Y2E8 581 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 FAM32AQ9Y421 112 aaKnown RBP4.67□□□□□ -1.66
SSR3-206ENST00000476217 DSPPQ9NZW4 1301 aa4.67□□□□□ -1.66
SSR3-206ENST00000476217 FER1L5A0AVI2 2057 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 NSG1A0A0A6YYJ2 146 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 NPIPA5A0A0B4J1W7 369 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 A0A1W2PNU3 283 aaPredicted RBP4.66□□□□□ -1.66
SSR3-206ENST00000476217 FRG2CA6NGY1 282 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 C21orf140B9A014 251 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 NPIPA7E9PJI5 369 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 SLC30A4O14863 429 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 CASQ2O14958 399 aaPredicted RBP4.66□□□□□ -1.66
SSR3-206ENST00000476217 ADAMDEC1O15204 470 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 HS6ST1O60243 411 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 KIAA0513O60268 411 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 FCMRO60667 390 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 RAD1O60671 282 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 KCNK2O95069 426 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 IGHEP01854 428 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 CLPSP04118 112 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 IGKV3-11P04433 115 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 DBIP07108 87 aaKnown RBP4.66□□□□□ -1.66
SSR3-206ENST00000476217 RAB40ALP0C0E4 278 aa4.66□□□□□ -1.66
SSR3-206ENST00000476217 PABPC4LP0CB38 370 aaKnown RBP4.66□□□□□ -1.66
SSR3-206ENST00000476217 NPIPA8P0DM63 369 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms