RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SLC35D2Q76EJ3 337 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 DEPDC4Q8N2C3 294 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 LZICQ8WZA0 190 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 GTPBP3Q969Y2 492 aaKnown RBP18.44■□□□□ 0.54
LIME1-204ENST00000476183 C18orf12Q96KH6 178 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 PRRC1Q96M27 445 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 SMR3AQ99954 134 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 GRIP2Q9C0E4 1043 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 SEC61A2Q9H9S3 476 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 MOKQ9UQ07 419 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 ATP23Q9Y6H3 246 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 CSPG4Q6UVK1 2322 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 J3KTA2 159 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 PIP5K1CO60331 668 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 OR7A10O76100 309 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 ZNF682O95780 498 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 SERPINA1P01009 418 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 HIST1H2ABP04908 130 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 THRBP10828 461 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 NCK1P16333 377 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 FUT1P19526 365 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 MELKQ14680 651 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 C11orf71Q6IPW1 123 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 HIST3H2AQ7L7L0 130 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 NANOGNBQ7Z5D8 188 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 PIGWQ7Z7B1 504 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 MYPOPQ86VE0 399 aaPredicted RBP18.43■□□□□ 0.54
LIME1-204ENST00000476183 OR6N1Q8NGY5 312 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 OR6X1Q8NH79 312 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 HIST1H2ACQ93077 130 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 SGTBQ96EQ0 304 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 KCTD14Q9BQ13 255 aaPredicted RBP18.43■□□□□ 0.54
LIME1-204ENST00000476183 FAIMQ9NVQ4 179 aa18.43■□□□□ 0.54
LIME1-204ENST00000476183 BLOC1S5-TXNDC5H3BN57 136 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 H7C1Q1 480 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 FFAR1O14842 300 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 NDUFS7O75251 213 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 IGF2P01344 180 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 IGLV1-44P01699 117 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 CELA3BP08861 270 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 INHBBP09529 407 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 CECR9P0C854 216 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 CSNK1A1P48729 337 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 FABP6P51161 128 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 RPL18Q07020 188 aaKnown RBP18.42■□□□□ 0.54
LIME1-204ENST00000476183 AGAP6Q5VW22 663 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 MUC15Q8N387 334 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 RBM15BQ8NDT2 890 aaKnown RBP18.42■□□□□ 0.54
LIME1-204ENST00000476183 TMEM54Q969K7 222 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 HSH2DQ96JZ2 352 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 COX4I2Q96KJ9 171 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 HS6ST2Q96MM7 605 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 ULBP2Q9BZM5 246 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 MAN2C1Q9NTJ4 1040 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 RHCGQ9UBD6 479 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 MED31Q9Y3C7 131 aa18.42■□□□□ 0.54
LIME1-204ENST00000476183 NDUFAB1O14561 156 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 IGKV3-15P01624 115 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 IGHV4-39P01824 125 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 IFNW1P05000 195 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 AQP2P41181 271 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 ST3GAL3Q11203 375 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 IFI44LQ53G44 452 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 ZNF627Q7L945 461 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 TSEN54Q7Z6J9 526 aaKnown RBP18.41■□□□□ 0.54
LIME1-204ENST00000476183 FAM169BQ8N8A8 192 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 LIPHQ8WWY8 451 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 GEMIN6Q8WXD5 167 aaKnown RBP18.41■□□□□ 0.54
LIME1-204ENST00000476183 TRMT61AQ96FX7 289 aaKnown RBP18.41■□□□□ 0.54
LIME1-204ENST00000476183 ADAD1Q96M93 576 aaKnown RBP18.41■□□□□ 0.54
LIME1-204ENST00000476183 SPAG4Q9NPE6 437 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 B3GAT2Q9NPZ5 323 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 CBLN4Q9NTU7 201 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 EGFL7Q9UHF1 273 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 GDF2Q9UK05 429 aaPredicted RBP18.41■□□□□ 0.54
LIME1-204ENST00000476183 ARL2BPQ9Y2Y0 163 aa18.41■□□□□ 0.54
LIME1-204ENST00000476183 NSD1Q96L73 2696 aaPredicted RBP18.41■□□□□ 0.54
LIME1-204ENST00000476183 F13BP05160 661 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 TSPAN19P0C672 248 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 CBR1P16152 277 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 PAX7P23759 505 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 CALCRP30988 508 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 NAAAQ02083 359 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 RUNX1T1Q06455 604 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 C3orf36Q3SXR2 165 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 ZNF544Q6NX49 715 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 LRFN4Q6PJG9 635 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 ZNF813Q6ZN06 617 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 MDP1Q86V88 176 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 OFCC1Q8IZS5 231 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 FBXL14Q8N1E6 418 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 RNF148Q8N7C7 305 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 MOSPD2Q8NHP6 518 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 FAM162AQ96A26 154 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 SLC25A44Q96H78 314 aaPredicted RBP18.4■□□□□ 0.54
LIME1-204ENST00000476183 BDH2Q9BUT1 245 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 KATNB1Q9BVA0 655 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 NOX3Q9HBY0 568 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 ARL8BQ9NVJ2 186 aa18.4■□□□□ 0.54
LIME1-204ENST00000476183 B3GNT2Q9NY97 397 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms