RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 OR5M11Q96RB7 305 aa12.31□□□□□ -0.44
TRAF4-210ENST00000475329 NAA11Q9BSU3 229 aaPredicted RBP12.31□□□□□ -0.44
TRAF4-210ENST00000475329 FUNDC2Q9BWH2 189 aa12.31□□□□□ -0.44
TRAF4-210ENST00000475329 ERVK13-1Q9NX77 482 aa12.31□□□□□ -0.44
TRAF4-210ENST00000475329 WASF3Q9UPY6 502 aa12.31□□□□□ -0.44
TRAF4-210ENST00000475329 RASD1Q9Y272 281 aa12.31□□□□□ -0.44
TRAF4-210ENST00000475329 MSRB2Q9Y3D2 182 aa12.31□□□□□ -0.44
TRAF4-210ENST00000475329 KCNMB2Q9Y691 235 aa12.31□□□□□ -0.44
TRAF4-210ENST00000475329 CNTRLQ7Z7A1 2325 aa12.31□□□□□ -0.44
TRAF4-210ENST00000475329 A0A0J9YW62 118 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 PRSS37A4D1T9 235 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 FAM166BA8MTA8 275 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 C12orf71A8MTZ7 269 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 TNFSF11O14788 317 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 DNPH1O43598 174 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 GLSO94925 669 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-210ENST00000475329 BCL10O95999 233 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 LIMS3P0CW19 117 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 LIMS4P0CW20 117 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 HSMCR30P0CW71 290 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 HLA-DOBP13765 273 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 IFNGR1P15260 489 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 PYCR1P32322 319 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 TGFBR2P37173 567 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 RFC3P40938 356 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 P2RY4P51582 365 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 WNT4P56705 351 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 HYAL4Q2M3T9 481 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 ARMCX4Q5H9R4 360 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 HDDC2Q7Z4H3 204 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 SLC22A16Q86VW1 577 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 P2RY8Q86VZ1 359 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 ANKRD13BQ86YJ7 626 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 PM20D2Q8IYS1 436 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 KDM8Q8N371 416 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 KLHL36Q8N4N3 616 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 TMEM251Q8N6I4 163 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 OR10H4Q8NGA5 316 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 OR51L1Q8NGJ5 315 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 OR52N1Q8NH53 320 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 SLC39A7Q92504 469 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 MGLLQ99685 303 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 DOK1Q99704 481 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 BCL7BQ9BQE9 202 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 ALG12Q9BV10 488 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 QPCTLQ9NXS2 382 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 VSX1Q9NZR4 365 aaPredicted RBP12.3□□□□□ -0.44
TRAF4-210ENST00000475329 B3GAT1Q9P2W7 334 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 ENPP5Q9UJA9 477 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 PCDHGB7Q9Y5F8 929 aa12.3□□□□□ -0.44
TRAF4-210ENST00000475329 LOC102725191A0A1B0GVB3 256 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 DAPL1A0PJW8 107 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 H3BMQ9 156 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 ACOT7O00154 380 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 EIF1AYO14602 144 aaKnown RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 CD36P16671 472 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 LIPAP38571 399 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 MAGEA5P43359 124 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 GFRA1P56159 465 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 PPIAP62937 165 aaKnown RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 DBPQ10586 325 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 MLLT11Q13015 90 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 TSTQ16762 297 aaKnown RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 EEF1A1P5Q5VTE0 462 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 TMEM225Q6GV28 225 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 ESPNLQ6ZVH7 1005 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 LHFPL3Q86UP9 236 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 GGNQ86UU5 652 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 SLC35F2Q8IXU6 374 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 ZFP62Q8NB50 900 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 C12orf43Q96C57 262 aaKnown RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 NMD3Q96D46 503 aaKnown RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 OPALINQ96PE5 141 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 NAA50Q9GZZ1 169 aaKnown RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 SYT4Q9H2B2 425 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 CAB39Q9Y376 341 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-210ENST00000475329 FKBP7Q9Y680 259 aa12.29□□□□□ -0.44
TRAF4-210ENST00000475329 MED19A0JLT2 244 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-210ENST00000475329 SLC22A23A1A5C7 686 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 ZNF814B7Z6K7 855 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 TRAF3IP2O43734 574 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-210ENST00000475329 AHCYL1O43865 530 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 GABARAPO95166 117 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 VAMP5O95183 116 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 SCG5P05408 212 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 OR2T7P0C7T2 308 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 CRABP1P29762 137 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 NAA10P41227 235 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-210ENST00000475329 CENPAP49450 140 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 BIDP55957 195 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 CLDN20P56880 219 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 H3F3AP84243 136 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 PDSS1Q5T2R2 415 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 LINC01590Q5TEZ4 76 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 OR2G6Q5TZ20 316 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 HBMQ6B0K9 141 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 DNM1P34Q6PK57 102 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 TMPRSS11AQ6ZMR5 421 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 SLC16A12Q6ZSM3 486 aa12.28□□□□□ -0.44
TRAF4-210ENST00000475329 ASB18Q6ZVZ8 466 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms