RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 SH3BGRP55822 239 aaPredicted RBP13.51□□□□□ -0.25
SRRT-209ENST00000474896 ADRM1Q16186 407 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 C16orf89Q6UX73 402 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 NET1Q7Z628 596 aaPredicted RBP13.51□□□□□ -0.25
SRRT-209ENST00000474896 SERPINA11Q86U17 422 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 CALHM3Q86XJ0 350 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 PTOV1Q86YD1 416 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 RBM15BQ8NDT2 890 aaKnown RBP13.51□□□□□ -0.25
SRRT-209ENST00000474896 MFSD8Q8NHS3 518 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 STK35Q8TDR2 534 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 SLC38A5Q8WUX1 472 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 TMEM19Q96HH6 336 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 SPATA9Q9BWV2 254 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 SPAG4Q9NPE6 437 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 CALML5Q9NZT1 146 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 ABCD2Q9UBJ2 740 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 ZNF232Q9UNY5 417 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 ZNF443Q9Y2A4 671 aaPredicted RBP13.51□□□□□ -0.25
SRRT-209ENST00000474896 AP3M1Q9Y2T2 418 aa13.51□□□□□ -0.25
SRRT-209ENST00000474896 IGHV2OR16-5A0A0B4J2B6 119 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 LYNX1G3V0Z9 82 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 ZNF432O94892 652 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 AHSA1O95433 338 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 LYNX1P0DP58 116 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 PNMTP11086 282 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 IFNGR1P15260 489 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 ARR3P36575 388 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 RPS5P46782 204 aaKnown RBP13.5□□□□□ -0.25
SRRT-209ENST00000474896 CRISP3P54108 245 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 CDK6Q00534 326 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 RBBP4Q09028 425 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 NPRL3Q12980 569 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 BNIP1Q12981 228 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 RIN1Q13671 783 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 LARS2Q15031 903 aaKnown RBP13.5□□□□□ -0.25
SRRT-209ENST00000474896 TRIP10Q15642 601 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 CDK20Q8IZL9 346 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 DEFB107AQ8IZN7 70 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 ANKK1Q8NFD2 765 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 NFKBIDQ8NI38 313 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 ZNF837Q96EG3 531 aaPredicted RBP13.5□□□□□ -0.25
SRRT-209ENST00000474896 GPR35Q9HC97 309 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 DYNLRB1Q9NP97 96 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 CHST2Q9Y4C5 530 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 ANK2Q01484 3957 aa13.5□□□□□ -0.25
SRRT-209ENST00000474896 DSPPQ9NZW4 1301 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 ZNF503-AS2A6NEH8 195 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 FAM220BPB1ANY3 271 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 C5orf58C9J3I9 102 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 FTCDNL1E5RQL4 147 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 SLC43A1O75387 559 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 IGFBP1P08833 259 aaPredicted RBP13.49□□□□□ -0.25
SRRT-209ENST00000474896 CAPZA2P47755 286 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 CDH15P55291 814 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 HOXC5Q00444 222 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 EGR4Q05215 589 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 LIPEQ05469 1076 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 RUNX1T1Q06455 604 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 GABPB1Q06547 395 aaPredicted RBP13.49□□□□□ -0.25
SRRT-209ENST00000474896 C1DQ13901 141 aaKnown RBP13.49□□□□□ -0.25
SRRT-209ENST00000474896 SCARB2Q14108 478 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 DAG1Q14118 895 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 CEACAM16Q2WEN9 425 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 RPS26P11Q5JNZ5 115 aaPredicted RBP13.49□□□□□ -0.25
SRRT-209ENST00000474896 RNF220Q5VTB9 566 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 MDP1Q86V88 176 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 GPR137CQ8N3F9 429 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 C11orf65Q8NCR3 313 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 IL17RDQ8NFM7 739 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 KTI12Q96EK9 354 aaPredicted RBP13.49□□□□□ -0.25
SRRT-209ENST00000474896 ZNF583Q96ND8 569 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 OXGR1Q96P68 337 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 PTDSS2Q9BVG9 487 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 C1orf21Q9H246 121 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 OCEL1Q9H607 264 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 ARMC7Q9H6L4 198 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 CRLF2Q9HC73 371 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 TAS2R1Q9NYW7 299 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 ADA2Q9NZK5 511 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 GMPR2Q9P2T1 348 aaKnown RBP13.49□□□□□ -0.25
SRRT-209ENST00000474896 SEC14L4Q9UDX3 406 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 METRNQ9UJH8 293 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 USP22Q9UPT9 525 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 RCE1Q9Y256 329 aa13.49□□□□□ -0.25
SRRT-209ENST00000474896 A0A0G2JPF8 293 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 HNRNPCL2B2RXH8 293 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 HNRNPCL3B7ZW38 293 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 EBAG9O00559 213 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 HNRNPCL1O60812 293 aaKnown RBP13.48□□□□□ -0.25
SRRT-209ENST00000474896 HNRNPCL4P0DMR1 293 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 GTF2E2P29084 291 aaKnown RBP13.48□□□□□ -0.25
SRRT-209ENST00000474896 PCGF2P35227 344 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 GSK3BP49841 420 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 CCNIQ14094 377 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 VMACQ2NL98 169 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 KRT80Q6KB66 452 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 REEP3Q6NUK4 255 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 ERICH5Q6P6B1 374 aa13.48□□□□□ -0.25
SRRT-209ENST00000474896 UGT2A3Q6UWM9 527 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms