RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 MS4A18Q3C1V0 323 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 LINC00303Q3SY05 128 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 RNFT1Q5M7Z0 435 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC35D3Q5M8T2 416 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 TMEM201Q5SNT2 666 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC25A30Q5SVS4 291 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 CARD17Q5XLA6 110 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 NIPAL3Q6P499 406 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 C19orf48Q6RUI8 117 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 CCDC103Q8IW40 242 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 LRRC75AQ8NAA5 344 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 NOXO1Q8NFA2 376 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 TSPAN14Q8NG11 270 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 OR9Q1Q8NGQ5 310 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 ASB10Q8WXI3 467 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 ROBO4Q8WZ75 1007 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF582Q96NG8 517 aaPredicted RBP9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 SNX18Q96RF0 628 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 UCN2Q96RP3 112 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 TRIB1Q96RU8 372 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 SRXN1Q9BYN0 137 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 MRPS26Q9BYN8 205 aaKnown RBP9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 ENKD1Q9H0I2 346 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 PRORYQ9H606 182 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF696Q9H7X3 374 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 HINT3Q9NQE9 182 aaKnown RBP9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 PARPBPQ9NWS1 579 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 MED29Q9NX70 200 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 CNOT2Q9NZN8 540 aaKnown RBP9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 WARS2Q9UGM6 360 aaKnown RBP9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 MOKQ9UQ07 419 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 NOSIPQ9Y314 301 aaKnown RBP9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF175Q9Y473 711 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 CEP295Q9C0D2 2601 aa9.18□□□□□ -0.94
PRPF38A-202ENST00000474048 LOC102725191A0A1B0GVB3 256 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 A0A1B0GVC2 190 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 PRSS37A4D1T9 235 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 CLCA1A8K7I4 914 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 CENPBD1B2RD01 187 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 KDM4EB2RXH2 506 aaPredicted RBP9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 H0YC42 278 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 H7C1C5 153 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 PRRG2O14669 202 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 MYL12BO14950 172 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 XPNPEP2O43895 674 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 CYTIPO60759 359 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 FZD7O75084 574 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 MRPL33O75394 65 aaKnown RBP9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC2A10O95528 541 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 RAB36O95755 333 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 DBTP11182 482 aaKnown RBP9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 ATP6V1B1P15313 513 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 CRHBPP24387 322 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 PTGER4P35408 488 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 CSNK1A1P48729 337 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF84P51523 738 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 PER3P56645 1201 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 LCN6P62502 163 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 GLO1Q04760 184 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF91Q05481 1191 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 FHL1Q13642 323 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 C3AR1Q16581 482 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 MESTQ5EB52 335 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 ABLIM2Q6H8Q1 611 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 OR2A2Q6IF42 318 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF585AQ6P3V2 769 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 TMEM154Q6P9G4 183 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 GFRALQ6UXV0 394 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 MEPCEQ7L2J0 689 aaKnown RBP9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 AAED1Q7RTV5 226 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 FAM122BQ7Z309 247 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 CCDC71Q8IV32 467 aaPredicted RBP9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 GPR137CQ8N3F9 429 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 CISD2Q8N5K1 135 aaKnown RBP9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 OR10H5Q8NGA6 315 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 OR6X1Q8NH79 312 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 FBLIM1Q8WUP2 373 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 UBE2FQ969M7 185 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 RNFT2Q96EX2 444 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC25A44Q96H78 314 aaPredicted RBP9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 WDYHV1Q96HA8 205 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF845Q96IR2 970 aaPredicted RBP9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 ADGRG7Q96K78 797 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 TAAR6Q96RI8 345 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 ALG12Q9BV10 488 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 PRDM14Q9GZV8 571 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 SYT4Q9H2B2 425 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 MED20Q9H944 212 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 SRA1Q9HD15 236 aaKnown RBP9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 AMBNQ9NP70 447 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 FANCFQ9NPI8 374 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 GLRX2Q9NS18 164 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 PLCXD1Q9NUJ7 323 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 SPRR3Q9UBC9 169 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 TNFRSF10DQ9UBN6 386 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 AASSQ9UDR5 926 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 RCE1Q9Y256 329 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 POLR1DQ9Y2S0 133 aa9.17□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC35F4A4IF30 521 aa9.16□□□□□ -0.94
PRPF38A-202ENST00000474048 OR6C65A6NJZ3 312 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms