RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CDH11P55287 796 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 RPL18Q07020 188 aaKnown RBP12.45□□□□□ -0.42
VAMP4-203ENST00000474047 MELKQ14680 651 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 TESK1Q15569 626 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 SPATS1Q496A3 300 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 ZNF672Q499Z4 452 aaPredicted RBP12.45□□□□□ -0.42
VAMP4-203ENST00000474047 SPNS3Q6ZMD2 512 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 HDDC2Q7Z4H3 204 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 OR6X1Q8NH79 312 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 BCAS4Q8TDM0 211 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 NEUROG1Q92886 237 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 ZNF566Q969W8 418 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 PIP5K1AQ99755 562 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 FAIMQ9NVQ4 179 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 CISD1Q9NZ45 108 aaKnown RBP12.45□□□□□ -0.42
VAMP4-203ENST00000474047 CD300AQ9UGN4 299 aa12.45□□□□□ -0.42
VAMP4-203ENST00000474047 ZNF99A8MXY4 864 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-203ENST00000474047 hCG_2039718K7EN88 272 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 FFAR1O14842 300 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 ARHGEF9O43307 516 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 H1F0P07305 194 aaKnown RBP12.44□□□□□ -0.42
VAMP4-203ENST00000474047 ROS1P08922 2347 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 AQP2P41181 271 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 CLRN1P58418 232 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 PHYHD1Q5SRE7 291 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 NRMQ8IXM6 262 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 RNF113BQ8IZP6 322 aaKnown RBP12.44□□□□□ -0.42
VAMP4-203ENST00000474047 SMAP2Q8WU79 429 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-203ENST00000474047 ACOT11Q8WXI4 607 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-203ENST00000474047 SLC25A44Q96H78 314 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-203ENST00000474047 PYURFQ96I23 114 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 CXorf56Q9H5V9 222 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 NMNAT1Q9HAN9 279 aaPredicted RBP12.44□□□□□ -0.42
VAMP4-203ENST00000474047 MOV10Q9HCE1 1003 aaKnown RBP12.44□□□□□ -0.42
VAMP4-203ENST00000474047 LAMP3Q9UQV4 416 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 ATP23Q9Y6H3 246 aa12.44□□□□□ -0.42
VAMP4-203ENST00000474047 EFCAB9A8MZ26 197 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 ARPC2O15144 300 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 SEC14L2O76054 403 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 RHCEP18577 417 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 DAP3P51398 398 aaKnown RBP12.43□□□□□ -0.42
VAMP4-203ENST00000474047 TUBA1BP68363 451 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 TUBA4AP68366 448 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 NKX6-1P78426 367 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-203ENST00000474047 LAPTM4AQ15012 233 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 FGD3Q5JSP0 725 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 ZNF813Q6ZN06 617 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 TUBA1AQ71U36 451 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 CCDC36Q8IYA8 594 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 LILRB1Q8NHL6 650 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-203ENST00000474047 MAGEE2Q8TD90 523 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-203ENST00000474047 LIPHQ8WWY8 451 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 GTPBP3Q969Y2 492 aaKnown RBP12.43□□□□□ -0.42
VAMP4-203ENST00000474047 ZNF837Q96EG3 531 aaPredicted RBP12.43□□□□□ -0.42
VAMP4-203ENST00000474047 BOD1Q96IK1 185 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 CXXC4Q9H2H0 198 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 ANKRD19PQ9H560 264 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 GLTPQ9NZD2 209 aa12.43□□□□□ -0.42
VAMP4-203ENST00000474047 HEATR1Q9H583 2144 aaKnown RBP12.43□□□□□ -0.42
VAMP4-203ENST00000474047 PRRC2AP48634 2157 aaKnown RBP12.43□□□□□ -0.42
VAMP4-203ENST00000474047 ARPC4-TTLL3A0A0A6YYG9 625 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 SHISA9B4DS77 424 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 IGHG1P01857 330 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 PRKCDQ05655 676 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 ALG10Q5BKT4 473 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 TBPL2Q6SJ96 375 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 NHLRC1Q6VVB1 395 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 MBOAT2Q6ZWT7 520 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 OAFQ86UD1 273 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 MEX3DQ86XN8 651 aaKnown RBP12.42□□□□□ -0.42
VAMP4-203ENST00000474047 ARHGAP24Q8N264 748 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 OR51A7Q8NH64 312 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 MOSPD2Q8NHP6 518 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 PERPQ96FX8 193 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 KRCC1Q9NPI7 259 aaPredicted RBP12.42□□□□□ -0.42
VAMP4-203ENST00000474047 MAN2C1Q9NTJ4 1040 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 NDUFAF4Q9P032 175 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 STX18Q9P2W9 335 aaKnown RBP12.42□□□□□ -0.42
VAMP4-203ENST00000474047 ALPK2Q86TB3 2170 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 CADP27708 2225 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 A0A087WUU8 490 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 ENTPD5O75356 428 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 STAMBPO95630 424 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 CRYAAP02489 173 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 CD79AP11912 226 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 SMIM11AP58511 58 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 RPS4XP62701 263 aaKnown RBP12.42□□□□□ -0.42
VAMP4-203ENST00000474047 SPOCK1Q08629 439 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 TAF11Q15544 211 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 RINLQ6ZS11 566 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 FAM86B1Q8N7N1 296 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 SLC38A2Q96QD8 506 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 NDEL1Q9GZM8 345 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 TMEM5Q9Y2B1 443 aa12.42□□□□□ -0.42
VAMP4-203ENST00000474047 OTOGQ6ZRI0 2925 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 TMCC2O75069 709 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 DIRAS1O95057 198 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 QDPRP09417 244 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 B4GALT1P15291 398 aa12.41□□□□□ -0.42
VAMP4-203ENST00000474047 MAKP20794 623 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 221.9 ms