RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 TSEN15Q8WW01 171 aaKnown RBP5.59□□□□□ -1.51
HERC4-209ENST00000473533 SMARCD2Q92925 531 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PTX4Q96A99 478 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 CTHRC1Q96CG8 243 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 FAHD2AQ96GK7 314 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 MS4A3Q96HJ5 214 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 MACROD1Q9BQ69 325 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 CCDC3Q9BQI4 270 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 SLC17A9Q9BYT1 436 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 RASL12Q9NYN1 266 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 FLRT3Q9NZU0 649 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PRODH2Q9UF12 536 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 COPS3Q9UNS2 423 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 HIF3AQ9Y2N7 669 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 PCDHGA5Q9Y5G8 931 aa5.59□□□□□ -1.51
HERC4-209ENST00000473533 OR52A4PA6NMU1 304 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 MCIDASD6RGH6 385 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 SELENOFO60613 162 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 RDH16O75452 317 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 RAB3DO95716 219 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 CYB5AP00167 134 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 CSTAP01040 98 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 ITGB2P05107 769 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 HOXB1P14653 301 aaPredicted RBP5.59□□□□□ -1.52
HERC4-209ENST00000473533 TBPP20226 339 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 MPGP29372 298 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 DRD3P35462 400 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 ACAA2P42765 397 aaKnown RBP5.59□□□□□ -1.52
HERC4-209ENST00000473533 SLC6A8P48029 635 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 TAS2R31P59538 309 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 ZNF660Q6AZW8 331 aaPredicted RBP5.59□□□□□ -1.52
HERC4-209ENST00000473533 LRRTM1Q86UE6 522 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 CDC20BQ86Y33 519 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 YAF2Q8IY57 180 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 OR10K1Q8NGX5 313 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 CXorf58Q96LI9 332 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 DCBLD2Q96PD2 775 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 NMNAT3Q96T66 252 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 PDCD10Q9BUL8 212 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 NKX6-2Q9C056 277 aaPredicted RBP5.59□□□□□ -1.52
HERC4-209ENST00000473533 MBNL1Q9NR56 388 aaKnown RBP5.59□□□□□ -1.52
HERC4-209ENST00000473533 GRHPRQ9UBQ7 328 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 ERVK-19Q9WJR5 959 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 PLEKHA6Q9Y2H5 1048 aa5.59□□□□□ -1.52
HERC4-209ENST00000473533 PRSS38A1L453 326 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 SERINC4A6NH21 518 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 CLDN4O14493 209 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 NRG2O14511 850 aaPredicted RBP5.58□□□□□ -1.52
HERC4-209ENST00000473533 APBB3O95704 486 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 PROS1P07225 676 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 CD34P28906 385 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 CTNNB1P35222 781 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 MC2RQ01718 297 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 SERTAD2Q14140 314 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 ALG10Q5BKT4 473 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 VWA2Q5GFL6 755 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 PHF19Q5T6S3 580 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 LIPNQ5VXI9 398 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 ACOT7LQ6ZUV0 252 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 SERPINA12Q8IW75 414 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 ARMC10Q8N2F6 343 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 C10orf53Q8N6V4 93 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 OR52R1Q8NGF1 315 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 OR1J4Q8NGS1 313 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 ING5Q8WYH8 240 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 INTS14Q96SY0 518 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 ORAI3Q9BRQ5 295 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 IL21RQ9HBE5 538 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 EXOSC3Q9NQT5 275 aaKnown RBP5.58□□□□□ -1.52
HERC4-209ENST00000473533 SLC39A1Q9NY26 324 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 COQ3Q9NZJ6 369 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 MYO7AQ13402 2215 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 ASCC3Q8N3C0 2202 aaKnown RBP5.58□□□□□ -1.52
HERC4-209ENST00000473533 A0A1W2PS29 197 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 METTL21EPA6NDL7 271 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 OR5K4A6NMS3 321 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 CHURC1-FNTBB4DL54 471 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 XKRYO14609 159 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 TNFRSF10CO14798 259 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 SIGLEC6O43699 453 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 CTAG2O75638 210 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 KDM4BO94953 1096 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 TIMP1P01033 207 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 HPGDP15428 266 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 CNR1P21554 472 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 MAOBP27338 520 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 ADH7P40394 386 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 SORDQ00796 357 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.58□□□□□ -1.524e-6■■■■□ 20.5
HERC4-209ENST00000473533 NKAPLQ5M9Q1 402 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 EIF5AL1Q6IS14 154 aaKnown RBP5.58□□□□□ -1.52
HERC4-209ENST00000473533 FBXO42Q6P3S6 717 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 MTFR2Q6P444 385 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 MOB3CQ70IA8 216 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 SYT9Q86SS6 491 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 OR4N5Q8IXE1 308 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 GABRG1Q8N1C3 465 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 MUC20Q8N307 709 aaPredicted RBP5.58□□□□□ -1.52
HERC4-209ENST00000473533 NKAIN3Q8N8D7 197 aa5.58□□□□□ -1.52
HERC4-209ENST00000473533 ZDHHC22Q8N966 263 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms