RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 B3GLCTQ6Y288 498 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 TMPPEQ6ZT21 453 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 ADCK1Q86TW2 530 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 DDIASQ8IXT1 998 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 CADM3Q8N126 398 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 NATD1Q8N6N6 113 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF540Q8NDQ6 660 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 HIPK4Q8NE63 616 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 OR56A1Q8NGH5 318 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 OR13F1Q8NGS4 319 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF563Q8TA94 476 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 SLC25A43Q8WUT9 341 aaPredicted RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 ST8SIA1Q92185 356 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 MOAP1Q96BY2 351 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 FBXO17Q96EF6 278 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 CDRT15Q96T59 188 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 PKP2Q99959 881 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 KCNS3Q9BQ31 491 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 THUMPD3Q9BV44 507 aaKnown RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 QRSL1Q9H0R6 528 aaKnown RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 C12orf65Q9H3J6 166 aaKnown RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 UPB1Q9UBR1 384 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 TRAF6Q9Y4K3 522 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 CCL27Q9Y4X3 112 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 PTGDR2Q9Y5Y4 395 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 SLC25A15Q9Y619 301 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 HEATR5AQ86XA9 2040 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 USF3Q68DE3 2245 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 SONP18583 2426 aaKnown RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 IGKV3D-15A0A087WSY6 115 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 RNF103-CHMP3A0A140T963 221 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 LOC105371267A0A1B0GV96 52 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 A0A1W2PPW3 197 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 LOC390937A0A1W2PQ73 354 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 SERINC4A6NH21 518 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 DUXAA6NLW8 204 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 BBIP1A8MTZ0 92 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 TMEM229AB2RXF0 380 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 NPIPB8E9PQR5 432 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 G3V2L1 256 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 M0R082 166 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 AZIN1O14977 448 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 SCAMP2O15127 329 aaKnown RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 SHOXO15266 292 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 TCF21O43680 179 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 SERPINI2O75830 405 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 SEC14L2O76054 403 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 WNT11O96014 354 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 CSTAP01040 98 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 PGRP06401 933 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 GPIP06744 558 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 LINC00032P0C843 101 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 KITP10721 976 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 FASP25445 335 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 FKBP2P26885 142 aaKnown RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 SOAT1P35610 550 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 SRP14P37108 136 aaKnown RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 APOBEC1P41238 236 aaKnown RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 NR4A2P43354 598 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 P2RX3P56373 397 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 DNAJB13P59910 316 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 CTAG1AP78358 180 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 RUNX1T1Q06455 604 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 GPR68Q15743 365 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 GABRA6Q16445 453 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 CEP78Q5JTW2 689 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 PDZK1Q5T2W1 519 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 C9orf135Q5VTT2 229 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 LIPMQ5VYY2 423 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 TTC23Q5W5X9 447 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 ABLIM2Q6H8Q1 611 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 EPGNQ6UW88 154 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 CASP12Q6UXS9 341 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 KCTD8Q6ZWB6 473 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF767PQ75MW2 155 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 EIF3MQ7L2H7 374 aaKnown RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 PRSS48Q7RTY5 328 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 SLC46A3Q7Z3Q1 461 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 C17orf78Q8N4C9 275 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 RFLNBQ8N5W9 214 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 OR5D16Q8NGK9 328 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 OR2T11Q8NH01 316 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF417Q8TAU3 575 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 PIGXQ8TBF5 258 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 OR5P2Q8WZ92 322 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 MSI2Q96DH6 328 aaKnown RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 DNAJA3Q96EY1 480 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 FCRL1Q96LA6 429 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 MUS81Q96NY9 551 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 OR7D2Q96RA2 312 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF587Q96SQ5 575 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 VRK1Q99986 396 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 ADI1Q9BV57 179 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 EML4Q9HC35 981 aaKnown RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 TNFRSF12AQ9NP84 129 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 MYOZ1Q9NP98 299 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 SIRT3Q9NTG7 399 aaPredicted RBP6.06□□□□□ -1.44
CKS1B-205ENST00000473344 PARPBPQ9NWS1 579 aa6.06□□□□□ -1.44
CKS1B-205ENST00000473344 OXSMQ9NWU1 459 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms