RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TMEM45BQ96B21 275 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 NMD3Q96D46 503 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 GIMAP5Q96F15 307 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 FCRL1Q96LA6 429 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 MUS81Q96NY9 551 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 TSSK3Q96PN8 268 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 KCNA7Q96RP8 456 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 TAPBPLQ9BX59 468 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 SRXN1Q9BYN0 137 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF350Q9GZX5 532 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 LAT2Q9GZY6 243 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF442Q9H7R0 627 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 CHODLQ9H9P2 273 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 CA10Q9NS85 328 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ACER3Q9NUN7 267 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 THUMPD1Q9NXG2 353 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 NPAP1Q9NZP6 1156 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 FLRT3Q9NZU0 649 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 TMEM181Q9P2C4 612 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 TRAPPC4Q9Y296 219 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 CARD8Q9Y2G2 431 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 GRIP1Q9Y3R0 1128 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 TIMM22Q9Y584 194 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 SLC25A15Q9Y619 301 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 CHD3Q12873 2000 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 EXPH5Q8NEV8 1989 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 A0A096LNT2 108 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 RNF103-CHMP3A0A140T963 221 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 WDR91A4D1P6 747 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 ZNF716A6NP11 495 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 C17orf51A8MQB3 221 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 B4DSR2 109 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 E7EQL1 145 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 NPIPB9F8W1W9 429 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 FAAHO00519 579 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 RIPK2O43353 540 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 PLIN3O60664 434 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 RAMP1O60894 148 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 SLU7O95391 586 aaKnown RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 TGFAP01135 160 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 CD8AP01732 235 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 TFP02787 698 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 MT-ND5P03915 603 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 NUDT17P0C025 328 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 UBTFL6P0CB48 400 aaPredicted RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 BCKDHAP12694 445 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 CPA3P15088 417 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 ANPEPP15144 967 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 CHN1P15882 459 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 GIFP27352 417 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 CHI3L1P36222 383 aaPredicted RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 ARR3P36575 388 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 SERPINF1P36955 418 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 EVX1P49640 407 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 ZNF83P51522 516 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 POLR2HP52434 150 aaKnown RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 CLNS1AP54105 237 aaKnown RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 DVL1P1P54792 670 aaPredicted RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 CDH15P55291 814 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 FOXA1P55317 472 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 ACTG1P63261 375 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 SSBP2P81877 361 aaPredicted RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 MRPS25P82663 173 aaKnown RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 KIAA0040Q15053 153 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 TRADDQ15628 312 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 ZNF141Q15928 474 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 GABRA6Q16445 453 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 CARTPTQ16568 116 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 GSTA3Q16772 222 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 ARHGAP11BQ3KRB8 267 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 GALNTL6Q49A17 601 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 PDZK1Q5T2W1 519 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 CCNJQ5T5M9 372 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 CBLN3Q6UW01 205 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 SYT10Q6XYQ8 523 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 ZNF782Q6ZMW2 699 aaPredicted RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 USP43Q70EL4 1123 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 RPS27LQ71UM5 84 aaKnown RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 RIBC1Q8N443 379 aaPredicted RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 EIF1ADQ8N9N8 165 aaKnown RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 FAM71CQ8NEG0 241 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 ATP6V1C2Q8NEY4 427 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 RFWD2Q8NHY2 731 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 MIPOL1Q8TD10 442 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 MAGEE2Q8TD90 523 aaPredicted RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 TWIST2Q8WVJ9 160 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 WDR60Q8WVS4 1066 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 SLC35B4Q969S0 331 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 FBXO17Q96EF6 278 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 SLC35G5Q96KT7 338 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 SLC38A2Q96QD8 506 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 CCDC106Q9BWC9 280 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 RBM4Q9BWF3 364 aaKnown RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 RTN4RQ9BZR6 473 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 DPY30Q9C005 99 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 PLK3Q9H4B4 646 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 DENND2DQ9H6A0 471 aaPredicted RBP3.04□□□□□ -1.92
XRN1-209ENST00000472625 DYNLRB1Q9NP97 96 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 SLC17A5Q9NRA2 495 aa3.04□□□□□ -1.92
XRN1-209ENST00000472625 TMEM45AQ9NWC5 275 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms