RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CASP9P55211 416 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 CLDN15P56746 228 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 RPL38P63173 70 aaKnown RBP3.36□□□□□ -1.87
COL9A1-206ENST00000470652 BTN3A2P78410 334 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 ARHGAP19Q14CB8 494 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 TAB1Q15750 504 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 SLC5A12Q1EHB4 618 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 DEFB134Q4QY38 66 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 VWA2Q5GFL6 755 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 XKR7Q5GH72 579 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 MED27Q6P2C8 311 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 WDR74Q6RFH5 385 aaPredicted RBP3.36□□□□□ -1.87
COL9A1-206ENST00000470652 TMIGD1Q6UXZ0 262 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 RBPMS2Q6ZRY4 209 aaKnown RBP3.36□□□□□ -1.87
COL9A1-206ENST00000470652 FCRLAQ7L513 359 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 OLIG3Q7RTU3 272 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 PRSS42Q7Z5A4 293 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 CROCCP2Q86T23 111 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 ASPGQ86U10 573 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 P2RY8Q86VZ1 359 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 SLC22A9Q8IVM8 553 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 TCAIMQ8N3R3 496 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 OR4D9Q8NGE8 314 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 C10orf82Q8WW14 230 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 SLC13A3Q8WWT9 602 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 METTL21AQ8WXB1 218 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 PROX1Q92786 737 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 NAT6Q93015 286 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 TSLPQ969D9 159 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 CIDECQ96AQ7 238 aaPredicted RBP3.36□□□□□ -1.87
COL9A1-206ENST00000470652 MS4A6EQ96DS6 147 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 TM4SF19Q96DZ7 209 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 FAM122AQ96E09 287 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 C19orf60Q96EN9 201 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 WDR34Q96EX3 536 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 OTUB1Q96FW1 271 aaPredicted RBP3.36□□□□□ -1.87
COL9A1-206ENST00000470652 CNDP1Q96KN2 507 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 AGAP4Q96P64 663 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 TSSK3Q96PN8 268 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 MAPKAP1Q9BPZ7 522 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 AIF1LQ9BQI0 150 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 NTMT1Q9BV86 223 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 RAB11FIP5Q9BXF6 653 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 CAPS2Q9BXY5 557 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 ACTL8Q9H568 366 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 ELOVL6Q9H5J4 265 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 UCK1Q9HA47 277 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 B3GAT2Q9NPZ5 323 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 NDE1Q9NXR1 346 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 SLC39A1Q9NY26 324 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 ARMCX1Q9P291 453 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 ANKMY1Q9P2S6 941 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 PRDM4Q9UKN5 801 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 NAALAD2Q9Y3Q0 740 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 ATG4BQ9Y4P1 393 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 SELENOKQ9Y6D0 94 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 CPAMD8Q8IZJ3 1885 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 BSNQ9UPA5 3926 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 PIEZO1Q92508 2521 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 APC2O95996 2303 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 PCNX3Q9H6A9 2034 aa3.36□□□□□ -1.87
COL9A1-206ENST00000470652 CHD8Q9HCK8 2581 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 NBEAQ8NFP9 2946 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CEP295Q9C0D2 2601 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 EXPH5Q8NEV8 1989 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 IGHV3OR16-10A0A075B7F0 116 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 A0A0A6YYD5 115 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 GMNCA6NCL1 334 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 A8MUA0 341 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 EPM2AB3EWF7 344 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 H0YIV9 168 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 LSM1O15116 133 aaKnown RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 PGRMC2O15173 223 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 SHOX2O60902 331 aaPredicted RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 B4GALT2O60909 372 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 SCRG1O75711 98 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 OR2B3O76000 313 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 KIAA0754O94854 1291 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 AIFM1O95831 613 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 OTCP00480 354 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ATP1B1P05026 303 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 IL3P08700 152 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 C8orf89P0DMQ9 161 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 SMIM10L1P0DMW3 83 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 UROSP10746 265 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ACADSP16219 412 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 SDC1P18827 310 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 CSRP1P21291 193 aaKnown RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ACHEP22303 614 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ATP5A1P25705 553 aaKnown RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ELAVL4P26378 380 aaKnown RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 RORAP35398 523 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 SOX3P41225 446 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 OR3A2P47893 321 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ZFP36L2P47974 494 aaKnown RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 DUSP3P51452 185 aaPredicted RBP3.35□□□□□ -1.87
COL9A1-206ENST00000470652 PKNOX1P55347 436 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 BTG2P78543 158 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ACSM1Q08AH1 577 aa3.35□□□□□ -1.87
COL9A1-206ENST00000470652 ILF2Q12905 390 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms