RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 CISD1Q9NZ45 108 aaKnown RBP12.36□□□□□ -0.43
TOP3B-215ENST00000470338 RHCGQ9UBD6 479 aa12.36□□□□□ -0.43
TOP3B-215ENST00000470338 ZNF99A8MXY4 864 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-215ENST00000470338 BLOC1S5-TXNDC5H3BN57 136 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 M0R3G1 203 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 SERPINI2O75830 405 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 MNAT1P51948 309 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 BIDP55957 195 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 RPL18Q07020 188 aaKnown RBP12.35□□□□□ -0.43
TOP3B-215ENST00000470338 FOXD4Q12950 439 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-215ENST00000470338 TRAM2Q15035 370 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 PGGHGQ32M88 737 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 C3orf36Q3SXR2 165 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 SPATS1Q496A3 300 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 SAMD4BQ5PRF9 694 aaKnown RBP12.35□□□□□ -0.43
TOP3B-215ENST00000470338 SHEQ5VZ18 495 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-215ENST00000470338 FAM169BQ8N8A8 192 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 FAM156AQ8NDB6 213 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 TMEM171Q8WVE6 324 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 CDRT15Q96T59 188 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 GSX2Q9BZM3 304 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 B3GAT2Q9NPZ5 323 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 ZNF701Q9NV72 531 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-215ENST00000470338 NDE1Q9NXR1 346 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 CRNNQ9UBG3 495 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-215ENST00000470338 ADAM21Q9UKJ8 722 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 LAMP3Q9UQV4 416 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 ENPP4Q9Y6X5 453 aa12.35□□□□□ -0.43
TOP3B-215ENST00000470338 A0A096LPE4 126 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 A0A1W2PPZ6 126 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 E7EQL1 145 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 OVOL3O00110 214 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 ARHGEF9O43307 516 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 PIP5K1CO60331 668 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 GMNNO75496 209 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 SOD3P08294 240 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 CDH11P55287 796 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 UBE2NP61088 152 aaKnown RBP12.34□□□□□ -0.43
TOP3B-215ENST00000470338 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.43
TOP3B-215ENST00000470338 PRKCDQ05655 676 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 SPOCK1Q08629 439 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 SLC22A25Q6T423 547 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 PRSS57Q6UWY2 283 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 C16orf89Q6UX73 402 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 CCDC36Q8IYA8 594 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 RNF113BQ8IZP6 322 aaKnown RBP12.34□□□□□ -0.43
TOP3B-215ENST00000470338 DEPDC4Q8N2C3 294 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 CCDC197Q8NCU1 140 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 RBM15BQ8NDT2 890 aaKnown RBP12.34□□□□□ -0.43
TOP3B-215ENST00000470338 WFDC11Q8NEX6 87 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 OR6N1Q8NGY5 312 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 TMEM54Q969K7 222 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 BPIFA2Q96DR5 249 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 SLC25A44Q96H78 314 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-215ENST00000470338 NSL1Q96IY1 281 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 C7orf34Q96L11 122 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 GRIP2Q9C0E4 1043 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 ANKRD19PQ9H560 264 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 CXorf56Q9H5V9 222 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 MOV10Q9HCE1 1003 aaKnown RBP12.34□□□□□ -0.43
TOP3B-215ENST00000470338 GLTPQ9NZD2 209 aa12.34□□□□□ -0.43
TOP3B-215ENST00000470338 SAMD4AQ9UPU9 718 aaKnown RBP12.34□□□□□ -0.43
TOP3B-215ENST00000470338 A0A087WUU8 490 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 IGHV1-18A0A0C4DH31 117 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 BCL10O95999 233 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 IGKV3-15P01624 115 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 IGLV1-44P01699 117 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 CD8AP01732 235 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 F13BP05160 661 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 PGA4P0DJD7 388 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 PGA3P0DJD8 388 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 IFI30P13284 250 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 CD99P14209 185 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 TCN1P20061 433 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-215ENST00000470338 AQP2P41181 271 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 CSNK1A1P48729 337 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 PTH2RP49190 550 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 RPS4XP62701 263 aaKnown RBP12.33□□□□□ -0.44
TOP3B-215ENST00000470338 LAPTM4AQ15012 233 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 HIST3H3Q16695 136 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 DTX2Q86UW9 622 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 CYP4Z1Q86W10 505 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 NRMQ8IXM6 262 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 DEFB107AQ8IZN7 70 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 FAM86B1Q8N7N1 296 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 ACOT11Q8WXI4 607 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-215ENST00000470338 ZNF566Q969W8 418 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 SLC38A2Q96QD8 506 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 DHRS9Q9BPW9 319 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 ULBP2Q9BZM5 246 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 NMNAT1Q9HAN9 279 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-215ENST00000470338 INIPQ9NRY2 104 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 B3GNT2Q9NY97 397 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 NDUFAF4Q9P032 175 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 MAGEL2Q9UJ55 1249 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 HIF3AQ9Y2N7 669 aa12.33□□□□□ -0.44
TOP3B-215ENST00000470338 ARFGEF3Q5TH69 2177 aa12.32□□□□□ -0.44
TOP3B-215ENST00000470338 A0A1W2PRG6 482 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms