RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 CCDC36Q8IYA8 594 aa12.24□□□□□ -0.45
COMMD3-208ENST00000470045 FBXL14Q8N1E6 418 aa12.24□□□□□ -0.45
COMMD3-208ENST00000470045 LRRC17Q8N6Y2 441 aa12.24□□□□□ -0.45
COMMD3-208ENST00000470045 ADAD1Q96M93 576 aaKnown RBP12.24□□□□□ -0.45
COMMD3-208ENST00000470045 CACNG6Q9BXT2 260 aa12.24□□□□□ -0.45
COMMD3-208ENST00000470045 MYLK2Q9H1R3 596 aa12.24□□□□□ -0.45
COMMD3-208ENST00000470045 BARX1Q9HBU1 254 aaPredicted RBP12.24□□□□□ -0.45
COMMD3-208ENST00000470045 NANSQ9NR45 359 aa12.24□□□□□ -0.45
COMMD3-208ENST00000470045 GMPR2Q9P2T1 348 aaKnown RBP12.24□□□□□ -0.45
COMMD3-208ENST00000470045 GDF2Q9UK05 429 aaPredicted RBP12.24□□□□□ -0.45
COMMD3-208ENST00000470045 TLN2Q9Y4G6 2542 aa12.24□□□□□ -0.45
COMMD3-208ENST00000470045 ATP23Q9Y6H3 246 aa12.24□□□□□ -0.45
COMMD3-208ENST00000470045 C11orf98E9PRG8 122 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 KPNA4O00629 521 aaPredicted RBP12.23□□□□□ -0.45
COMMD3-208ENST00000470045 NME4O00746 187 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 SHOX2O60902 331 aaPredicted RBP12.23□□□□□ -0.45
COMMD3-208ENST00000470045 LY6G6DO95868 133 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 MT-ND1P03886 318 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 TSPAN19P0C672 248 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 IFNGR1P15260 489 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 CBR1P16152 277 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 AHCYP23526 432 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 APOBEC3AP31941 199 aaPredicted RBP12.23□□□□□ -0.45
COMMD3-208ENST00000470045 ACVR1BP36896 505 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 OR1E2P47887 323 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 UGT2B15P54855 530 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 TAS2R41P59536 307 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 SELENOWP63302 87 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 PIN1Q13526 163 aaPredicted RBP12.23□□□□□ -0.45
COMMD3-208ENST00000470045 CAMK2DQ13557 499 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 KRTAP21-3Q3LHN1 58 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 CARD17Q5XLA6 110 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 SLC35D2Q76EJ3 337 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 MYPOPQ86VE0 399 aaPredicted RBP12.23□□□□□ -0.45
COMMD3-208ENST00000470045 OR6X1Q8NH79 312 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 TMEM255BQ8WV15 326 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 LIPHQ8WWY8 451 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 HOPXQ9BPY8 73 aaPredicted RBP12.23□□□□□ -0.45
COMMD3-208ENST00000470045 SEC61A2Q9H9S3 476 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 B3GAT2Q9NPZ5 323 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 B3GNT2Q9NY97 397 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 RIMS3Q9UJD0 308 aa12.23□□□□□ -0.45
COMMD3-208ENST00000470045 FN1P02751 2386 aaKnown RBP12.23□□□□□ -0.45
COMMD3-208ENST00000470045 ZNF726A6NNF4 738 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 SMAD7O15105 426 aaKnown RBP12.22□□□□□ -0.45
COMMD3-208ENST00000470045 SEC14L2O76054 403 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 OR6A2O95222 327 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 CRYAAP02489 173 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 ARR3P36575 388 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 SLC7A2P52569 658 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 SEC24CP53992 1094 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 BIDP55957 195 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 LIPEQ05469 1076 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 SWI5Q1ZZU3 235 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 THSD4Q6ZMP0 1018 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 NANOGNBQ7Z5D8 188 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 OR6N1Q8NGY5 312 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 PFN4Q8NHR9 129 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 TMEM239Q8WW34 195 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 TMEM54Q969K7 222 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 PRRC1Q96M27 445 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 HS6ST2Q96MM7 605 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 ZNF75AQ96N20 296 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 KCNK17Q96T54 332 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 FOXB1Q99853 325 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 ELAC2Q9BQ52 826 aaKnown RBP12.22□□□□□ -0.45
COMMD3-208ENST00000470045 ULBP2Q9BZM5 246 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 EFCAB1Q9HAE3 211 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 C20orf141Q9NUB4 165 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 ABCD2Q9UBJ2 740 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 A4GNTQ9UNA3 340 aa12.22□□□□□ -0.45
COMMD3-208ENST00000470045 SNX3O60493 162 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 SERPINI2O75830 405 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 PDE5AO76074 875 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 OR7A10O76100 309 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 CELA3BP08861 270 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 PGA4P0DJD7 388 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 PGA3P0DJD8 388 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 CALCRP30988 508 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 CSNK1A1P48729 337 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 GSK3BP49841 420 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 KRTAP1-1Q07627 177 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 MST1LQ2TV78 715 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 ZNF813Q6ZN06 617 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 Q71RC1 249 aaPredicted RBP12.21□□□□□ -0.45
COMMD3-208ENST00000470045 MDP1Q86V88 176 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 NUP37Q8NFH4 326 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 LZICQ8WZA0 190 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 SLC25A44Q96H78 314 aaPredicted RBP12.21□□□□□ -0.45
COMMD3-208ENST00000470045 TPD52L3Q96J77 140 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 SEPHS2Q99611 448 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 KCNS3Q9BQ31 491 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 NOX3Q9HBY0 568 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 CA10Q9NS85 328 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 GLTPQ9NZD2 209 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 ZNF224Q9NZL3 707 aa12.21□□□□□ -0.45
COMMD3-208ENST00000470045 CSPG4Q6UVK1 2322 aa12.21□□□□□ -0.46
COMMD3-208ENST00000470045 IGHV2OR16-5A0A0B4J2B6 119 aa12.2□□□□□ -0.46
COMMD3-208ENST00000470045 HTR3EA5X5Y0 456 aa12.2□□□□□ -0.46
COMMD3-208ENST00000470045 NPIPB13A6NJU9 1138 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms