RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SNAPC1Q16533 368 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ACKR1Q16570 336 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 EMC4Q5J8M3 183 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 SLC35F1Q5T1Q4 408 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ANKRD34AQ69YU3 496 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 MTFR2Q6P444 385 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 NIPAL3Q6P499 406 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 DNM1P34Q6PK57 102 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 PLXDC2Q6UX71 529 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 AAED1Q7RTV5 226 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ABHD12BQ7Z5M8 362 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ADCK1Q86TW2 530 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 KIF18BQ86Y91 864 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 DOLPP1Q86YN1 238 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 TUSC5Q8IXB3 177 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 UBE2J2Q8N2K1 259 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 GPR137CQ8N3F9 429 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 C9orf106Q8NAJ2 232 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 PLPP7Q8NBV4 271 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 OR6N1Q8NGY5 312 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 MBD3L2Q8NHZ7 208 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 NRG4Q8WWG1 115 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 RND1Q92730 232 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF566Q969W8 418 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 APH1AQ96BI3 265 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 INTS12Q96CB8 462 aaKnown RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF184Q99676 751 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ADI1Q9BV57 179 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 PLA2G12AQ9BZM1 189 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 TXNIPQ9H3M7 391 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 C12orf49Q9H741 205 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 RNF122Q9H9V4 155 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 SLC25A19Q9HC21 320 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 FANCFQ9NPI8 374 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ASB6Q9NWX5 421 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 MED29Q9NX70 200 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 TAS2R5Q9NYW4 299 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 IL20Q9NYY1 176 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 TVP23BQ9NYZ1 205 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 COQ3Q9NZJ6 369 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 UPB1Q9UBR1 384 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 REV1Q9UBZ9 1251 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 TMEFF2Q9UIK5 374 aaPredicted RBP7.23□□□□□ -1.25
HDAC6-216ENST00000468949 RCE1Q9Y256 329 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF835Q9Y2P0 537 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 ADAM18Q9Y3Q7 739 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 FLVCR1Q9Y5Y0 555 aa7.23□□□□□ -1.25
HDAC6-216ENST00000468949 FLNBO75369 2602 aaKnown RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ASH1LQ9NR48 2969 aaKnown RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 IGKV3D-15A0A087WSY6 115 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 LOC100130705A0A1B0GUX0 176 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 LOC102725191A0A1B0GVB3 256 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 OR6C65A6NJZ3 312 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF716A6NP11 495 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF814B7Z6K7 855 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 EEF1E1-BLOC1S5C9J1V9 151 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 E9PLN8 166 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 MS4A18H0YCH9 400 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 DVL2O14641 736 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 IMPA2O14732 288 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ARHGEF9O43307 516 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 EEF1E1O43324 174 aaKnown RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 TRAF3IP2O43734 574 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 MPZL2O60487 215 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 RAMP1O60894 148 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 SS18L1O75177 396 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 PTP4A3O75365 173 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 SMNDC1O75940 238 aaKnown RBP eCLIP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 CRHP06850 196 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 IGFBP1P08833 259 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 HLA-DOBP13765 273 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 APEHP13798 732 aaKnown RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ZNF26P17031 533 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 KLK2P20151 261 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 AGTR1P30556 359 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 OPRM1P35372 400 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 TIMP3P35625 211 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 CAPGP40121 348 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 GUCA1AP43080 201 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 CSNK1A1P48729 337 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 CENPAP49450 140 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 P2RY4P51582 365 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 IL5RAQ01344 420 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 PMPCAQ10713 525 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 CAMK2DQ13557 499 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 KEAP1Q14145 624 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 MS4A18Q3C1V0 323 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 RIPPLY2Q5TAB7 128 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 TMEM236Q5W0B7 351 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 KRT80Q6KB66 452 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 LEG1Q6P5S2 330 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 CREB3L2Q70SY1 520 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 FAM214BQ7L5A3 538 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 ADGRE4PQ86SQ3 457 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 FJX1Q86VR8 437 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 CHERPQ8IWX8 916 aaKnown RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 C8orf59Q8N0T1 100 aaPredicted RBP7.22□□□□□ -1.25
HDAC6-216ENST00000468949 LNX2Q8N448 690 aa7.22□□□□□ -1.25
HDAC6-216ENST00000468949 SDR9C7Q8NEX9 313 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms