RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 B4GALT1P15291 398 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 PCGF2P35227 344 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 BIDP55957 195 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 VLDLRP98155 873 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 HGFACQ04756 655 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 SF3A3Q12874 501 aaKnown RBP eCLIP18.88■□□□□ 0.61
TTC28-204ENST00000468807 CHRFAM7AQ494W8 412 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 INTS11Q5TA45 600 aaKnown RBP18.88■□□□□ 0.61
TTC28-204ENST00000468807 KRT80Q6KB66 452 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 WDR88Q6ZMY6 472 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 SPATA21Q7Z572 469 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 WDFY1Q8IWB7 410 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 CCDC36Q8IYA8 594 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 OR4D11Q8NGI4 311 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 ADAMTS16Q8TE57 1224 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 TAMM41Q96BW9 452 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 LRR1Q96L50 414 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 KCNK17Q96T54 332 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 TMEM120AQ9BXJ8 343 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 MXRA5Q9NR99 2828 aa18.88■□□□□ 0.61
TTC28-204ENST00000468807 IGHV2OR16-5A0A0B4J2B6 119 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 UMPSP11172 480 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 IFNGR1P15260 489 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 H2AFXP16104 143 aaPredicted RBP18.87■□□□□ 0.61
TTC28-204ENST00000468807 ZNF16P17020 682 aaPredicted RBP18.87■□□□□ 0.61
TTC28-204ENST00000468807 NPR2P20594 1047 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 CSNK1A1P48729 337 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 SNTB2Q13425 540 aaKnown RBP18.87■□□□□ 0.61
TTC28-204ENST00000468807 CYLC2Q14093 348 aaPredicted RBP18.87■□□□□ 0.61
TTC28-204ENST00000468807 EFNB3Q15768 340 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 GSG1Q2KHT4 349 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 TRMT5Q32P41 509 aaKnown RBP18.87■□□□□ 0.61
TTC28-204ENST00000468807 MMEL1Q495T6 779 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 METTL21CQ5VZV1 264 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 CYB5R2Q6BCY4 276 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 SNX32Q86XE0 403 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 SVOPLQ8N434 492 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 PLK3Q9H4B4 646 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 NOX3Q9HBY0 568 aa18.87■□□□□ 0.61
TTC28-204ENST00000468807 SH3PXD2BA1X283 911 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 TRAPPC13A5PLN9 417 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 RNF13O43567 381 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 THY1P04216 161 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 HIST1H2ABP04908 130 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 CD247P20963 164 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 PTDSS1P48651 473 aaKnown RBP18.86■□□□□ 0.61
TTC28-204ENST00000468807 PPOXP50336 477 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 LSM11P83369 360 aaKnown RBP eCLIP18.86■□□□□ 0.61
TTC28-204ENST00000468807 DAG1Q14118 895 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 ZNF74Q16587 644 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 VMACQ2NL98 169 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 IQCCQ4KMZ1 466 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 LINC00114Q6XXX2 140 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 HIST3H2AQ7L7L0 130 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 IL17RDQ8NFM7 739 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 HIST1H2ACQ93077 130 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 MS4A3Q96HJ5 214 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 FOXB1Q99853 325 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 RAB1BQ9H0U4 201 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 ZNF442Q9H7R0 627 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 DYNLRB1Q9NP97 96 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 NANSQ9NR45 359 aa18.86■□□□□ 0.61
TTC28-204ENST00000468807 NDUFS8O00217 210 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 FBP2O00757 339 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 SASH3O75995 380 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 IFNA2P01563 188 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 ERCC1P07992 297 aaPredicted RBP18.85■□□□□ 0.61
TTC28-204ENST00000468807 IGHV4-31P0DP07 118 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 TROVE2P10155 538 aaKnown RBP eCLIP18.85■□□□□ 0.61
TTC28-204ENST00000468807 NR4A2P43354 598 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 RABL3Q5HYI8 236 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 NANOGP8Q6NSW7 305 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 SLC35D2Q76EJ3 337 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 LRRC17Q8N6Y2 441 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 RASSF5Q8WWW0 418 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 FOXN4Q96NZ1 517 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 NANOGQ9H9S0 305 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 SH3GLB1Q9Y371 365 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 SVEP1Q4LDE5 3571 aa18.85■□□□□ 0.61
TTC28-204ENST00000468807 LOC390937A0A1W2PQ73 354 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 LYPD3O95274 346 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 RAB36O95755 333 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 VIMP08670 466 aaKnown RBP18.84■□□□□ 0.61
TTC28-204ENST00000468807 MELKQ14680 651 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 PODNL1Q6PEZ8 512 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 NHLRC1Q6VVB1 395 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 CXXC5Q7LFL8 322 aaKnown RBP18.84■□□□□ 0.61
TTC28-204ENST00000468807 TSPYL5Q86VY4 417 aaPredicted RBP18.84■□□□□ 0.61
TTC28-204ENST00000468807 ZCCHC24Q8N2G6 241 aaKnown RBP18.84■□□□□ 0.61
TTC28-204ENST00000468807 SH3GL1Q99961 368 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 ECSITQ9BQ95 431 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 MYOZ1Q9NP98 299 aaPredicted RBP18.84■□□□□ 0.61
TTC28-204ENST00000468807 B3GNT2Q9NY97 397 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 CDC42EP3Q9UKI2 254 aa18.84■□□□□ 0.61
TTC28-204ENST00000468807 GZMMP51124 257 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 ARFIP2P53365 341 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 GKAP1Q5VSY0 366 aaPredicted RBP18.83■□□□□ 0.6
TTC28-204ENST00000468807 NANOGNBQ7Z5D8 188 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 CDK20Q8IZL9 346 aa18.83■□□□□ 0.6
TTC28-204ENST00000468807 OR6X1Q8NH79 312 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms