RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 NAA10P41227 235 aaPredicted RBP17.02■□□□□ 0.31
SMC4-209ENST00000468653 CCL11P51671 97 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 RAP1BP61224 184 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 VBP1P61758 197 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 RAP1AP62834 184 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 MFAP5Q13361 173 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 AQP6Q13520 282 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 GALEQ14376 348 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 SSX1Q16384 188 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 ZNF322Q6U7Q0 402 aaPredicted RBP17.02■□□□□ 0.31
SMC4-209ENST00000468653 SLC35D2Q76EJ3 337 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 SULF2Q8IWU5 870 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 OR6V1Q8N148 313 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 SMAP2Q8WU79 429 aaPredicted RBP17.02■□□□□ 0.31
SMC4-209ENST00000468653 SPRYD4Q8WW59 207 aaPredicted RBP17.02■□□□□ 0.31
SMC4-209ENST00000468653 SLC39A7Q92504 469 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 ARHGAP9Q9BRR9 750 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 B4GALT7Q9UBV7 327 aa17.02■□□□□ 0.31
SMC4-209ENST00000468653 MRPS18CQ9Y3D5 142 aaKnown RBP17.02■□□□□ 0.31
SMC4-209ENST00000468653 A0A1W2PNV4 684 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 NPIPB13A6NJU9 1138 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 NPIPB4C9JG80 1138 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 SH3BGRP55822 239 aaPredicted RBP17.01■□□□□ 0.31
SMC4-209ENST00000468653 B3GALT5-AS1P59052 145 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 SPCS2Q15005 226 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 LINC01590Q5TEZ4 76 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 TMEM225Q6GV28 225 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 SLC25A25Q6KCM7 469 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 SLC35F2Q8IXU6 374 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 ZNF485Q8NCK3 441 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 KCNE4Q8WWG9 221 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 ASB10Q8WXI3 467 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 SFXN2Q96NB2 322 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 FANCFQ9NPI8 374 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 KLF13Q9Y2Y9 288 aaPredicted RBP17.01■□□□□ 0.31
SMC4-209ENST00000468653 NOX1Q9Y5S8 564 aa17.01■□□□□ 0.31
SMC4-209ENST00000468653 A0A1W2PQL4 384 aaPredicted RBP17■□□□□ 0.31
SMC4-209ENST00000468653 DCTN6O00399 190 aa17■□□□□ 0.31
SMC4-209ENST00000468653 SELENOFO60613 162 aa17■□□□□ 0.31
SMC4-209ENST00000468653 SP1P08047 785 aa17■□□□□ 0.31
SMC4-209ENST00000468653 OR2T7P0C7T2 308 aa17■□□□□ 0.31
SMC4-209ENST00000468653 CPEP16870 476 aa17■□□□□ 0.31
SMC4-209ENST00000468653 ARG2P78540 354 aa17■□□□□ 0.31
SMC4-209ENST00000468653 CDC20Q12834 499 aa17■□□□□ 0.31
SMC4-209ENST00000468653 TIMM50Q3ZCQ8 353 aa17■□□□□ 0.31
SMC4-209ENST00000468653 WIPI1Q5MNZ9 446 aaPredicted RBP17■□□□□ 0.31
SMC4-209ENST00000468653 LIPKQ5VXJ0 399 aa17■□□□□ 0.31
SMC4-209ENST00000468653 FAM205BPQ63HN1 556 aa17■□□□□ 0.31
SMC4-209ENST00000468653 ATCAYQ86WG3 371 aa17■□□□□ 0.31
SMC4-209ENST00000468653 UEVLDQ8IX04 471 aa17■□□□□ 0.31
SMC4-209ENST00000468653 MDS2Q8NDY4 140 aa17■□□□□ 0.31
SMC4-209ENST00000468653 OR2T27Q8NH04 317 aa17■□□□□ 0.31
SMC4-209ENST00000468653 TM9SF4Q92544 642 aa17■□□□□ 0.31
SMC4-209ENST00000468653 KLHL15Q96M94 604 aa17■□□□□ 0.31
SMC4-209ENST00000468653 OR2B2Q9GZK3 357 aa17■□□□□ 0.31
SMC4-209ENST00000468653 NUAK2Q9H093 628 aa17■□□□□ 0.31
SMC4-209ENST00000468653 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17■□□□□ 0.317e-12■■■■■ 38.5
SMC4-209ENST00000468653 OR51E2Q9H255 320 aa17■□□□□ 0.31
SMC4-209ENST00000468653 VSX1Q9NZR4 365 aaPredicted RBP17■□□□□ 0.31
SMC4-209ENST00000468653 LOC100506127A0A0U1RQW1 187 aa17■□□□□ 0.31
SMC4-209ENST00000468653 TFP02787 698 aa17■□□□□ 0.31
SMC4-209ENST00000468653 CD46P15529 392 aa17■□□□□ 0.31
SMC4-209ENST00000468653 HCCSP53701 268 aa17■□□□□ 0.31
SMC4-209ENST00000468653 NCS1P62166 190 aa17■□□□□ 0.31
SMC4-209ENST00000468653 CSNK2A1P68400 391 aaPredicted RBP17■□□□□ 0.31
SMC4-209ENST00000468653 ZNF85Q03923 595 aa17■□□□□ 0.31
SMC4-209ENST00000468653 FOXC1Q12948 553 aa17■□□□□ 0.31
SMC4-209ENST00000468653 EEF1A1P5Q5VTE0 462 aa17■□□□□ 0.31
SMC4-209ENST00000468653 C19orf48Q6RUI8 117 aa17■□□□□ 0.31
SMC4-209ENST00000468653 GPAT4Q86UL3 456 aa17■□□□□ 0.31
SMC4-209ENST00000468653 PHC2Q8IXK0 858 aa17■□□□□ 0.31
SMC4-209ENST00000468653 ZNF511Q8NB15 262 aa17■□□□□ 0.31
SMC4-209ENST00000468653 UFD1Q92890 307 aa17■□□□□ 0.31
SMC4-209ENST00000468653 TXNDC15Q96J42 360 aa17■□□□□ 0.31
SMC4-209ENST00000468653 CHCHD6Q9BRQ6 235 aa17■□□□□ 0.31
SMC4-209ENST00000468653 ZNF552Q9H707 407 aaPredicted RBP17■□□□□ 0.31
SMC4-209ENST00000468653 MED29Q9NX70 200 aa17■□□□□ 0.31
SMC4-209ENST00000468653 KLK13Q9UKR3 277 aa17■□□□□ 0.31
SMC4-209ENST00000468653 FKBP7Q9Y680 259 aa17■□□□□ 0.31
SMC4-209ENST00000468653 MED12Q93074 2177 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 PNMA8CA0A1B0GUJ8 204 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 SLC22A23A1A5C7 686 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 AQP7P3A6NL99 342 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 SEC14L5O43304 696 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 AKAP8O43823 692 aaKnown RBP16.99■□□□□ 0.31
SMC4-209ENST00000468653 NME2P1O60361 137 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 SLC16A7O60669 478 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 ZNF182P17025 639 aaPredicted RBP16.99■□□□□ 0.31
SMC4-209ENST00000468653 NME2P22392 152 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 RFC3P40938 356 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 P2RY4P51582 365 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 PLGLB1Q02325 96 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 RUNX1T1Q06455 604 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 LSAMPQ13449 338 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 CRTC2Q53ET0 693 aaPredicted RBP16.99■□□□□ 0.31
SMC4-209ENST00000468653 LYPD4Q6UWN0 246 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 GALNTL5Q7Z4T8 443 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 HAS2Q92819 552 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 OXGR1Q96P68 337 aa16.99■□□□□ 0.31
SMC4-209ENST00000468653 RNF32Q9H0A6 362 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms