RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 GDF2Q9UK05 429 aaPredicted RBP14.89□□□□□ -0.03
SSBP1-207ENST00000468267 SONP18583 2426 aaKnown RBP14.88□□□□□ -0.03
SSBP1-207ENST00000468267 SHOX2O60902 331 aaPredicted RBP14.88□□□□□ -0.03
SSBP1-207ENST00000468267 SERPINI2O75830 405 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 IGKV3-15P01624 115 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 HIST1H2ABP04908 130 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 HEXAP06865 529 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 ASAH2BP0C7U1 165 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 CECR9P0C854 216 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 IFNGR1P15260 489 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 CBR1P16152 277 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 ACVR1BP36896 505 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 RBM34P42696 430 aaKnown RBP14.88□□□□□ -0.03
SSBP1-207ENST00000468267 SELENOWP63302 87 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 PIN1Q13526 163 aaPredicted RBP14.88□□□□□ -0.03
SSBP1-207ENST00000468267 DNM1P46Q6ZS02 220 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 SLC35D2Q76EJ3 337 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 HIST3H2AQ7L7L0 130 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 SPATA21Q7Z572 469 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 NKAIN4Q8IVV8 208 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 OR6N1Q8NGY5 312 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 HIST1H2ACQ93077 130 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 TPD52L3Q96J77 140 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 ADAD1Q96M93 576 aaKnown RBP14.88□□□□□ -0.03
SSBP1-207ENST00000468267 HS6ST2Q96MM7 605 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 HOPXQ9BPY8 73 aaPredicted RBP14.88□□□□□ -0.03
SSBP1-207ENST00000468267 KCNS3Q9BQ31 491 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 ELAC2Q9BQ52 826 aaKnown RBP14.88□□□□□ -0.03
SSBP1-207ENST00000468267 EFCAB1Q9HAE3 211 aa14.88□□□□□ -0.03
SSBP1-207ENST00000468267 GMPR2Q9P2T1 348 aaKnown RBP14.88□□□□□ -0.03
SSBP1-207ENST00000468267 CR1P17927 2039 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 RTTNQ86VV8 2226 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 RNF13O43567 381 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 CRYAAP02489 173 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 MT-ND1P03886 318 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 THRBP10828 461 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 HOXB4P17483 251 aaPredicted RBP14.87□□□□□ -0.03
SSBP1-207ENST00000468267 SEC24CP53992 1094 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 BIDP55957 195 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 NAAAQ02083 359 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 LIPEQ05469 1076 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 C8orf82Q6P1X6 216 aaPredicted RBP14.87□□□□□ -0.03
SSBP1-207ENST00000468267 HACD2Q6Y1H2 254 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 ZNF627Q7L945 461 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 SLC46A3Q7Z3Q1 461 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 OR6X1Q8NH79 312 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 TMEM255BQ8WV15 326 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 POM121Q96HA1 1249 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 MYLK2Q9H1R3 596 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 POFUT2Q9Y2G5 429 aa14.87□□□□□ -0.03
SSBP1-207ENST00000468267 ZNF503-AS2A6NEH8 195 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 NME4O00746 187 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 SEC14L2O76054 403 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 IGF2P01344 180 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 UMPSP11172 480 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 CSNK1A1P48729 337 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 UGT2B15P54855 530 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 CHRNB3Q05901 458 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 PFN4Q8NHR9 129 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 TMEM239Q8WW34 195 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 LZICQ8WZA0 190 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 TMEM54Q969K7 222 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 ULBP2Q9BZM5 246 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 SEC61A2Q9H9S3 476 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 B3GNT2Q9NY97 397 aa14.86□□□□□ -0.03
SSBP1-207ENST00000468267 RNF223E7ERA6 249 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 BLOC1S5-TXNDC5H3BN57 136 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 H7C417 338 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 CXCR6O00574 342 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 OR7A10O76100 309 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 CELA3BP08861 270 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 BMP4P12644 408 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 FUT1P19526 365 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 CALCRP30988 508 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 ARR3P36575 388 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 SLC7A2P52569 658 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 RAB35Q15286 201 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 SWI5Q1ZZU3 235 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 MST1LQ2TV78 715 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 ZNF813Q6ZN06 617 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 NANOGNBQ7Z5D8 188 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 MDP1Q86V88 176 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 MYPOPQ86VE0 399 aaPredicted RBP14.85□□□□□ -0.03
SSBP1-207ENST00000468267 OR4F15Q8NGB8 312 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 LIPHQ8WWY8 451 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 CMTM5Q96DZ9 223 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 SGTBQ96EQ0 304 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 SLC25A44Q96H78 314 aaPredicted RBP14.85□□□□□ -0.03
SSBP1-207ENST00000468267 REG4Q9BYZ8 158 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 C20orf141Q9NUB4 165 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 GLTPQ9NZD2 209 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 A4GNTQ9UNA3 340 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 PMF1-BGLAPU3KQ54 211 aa14.85□□□□□ -0.03
SSBP1-207ENST00000468267 ANK3Q12955 4377 aaKnown RBP14.85□□□□□ -0.03
SSBP1-207ENST00000468267 GSTA4O15217 222 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 SSX4O60224 188 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 HLA-HP01893 362 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 DRD4P21917 467 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 CAPZA2P47755 286 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 GSK3BP49841 420 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms