RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 FXYD1O00168 92 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 PDE5AO76074 875 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 IFNA14P01570 189 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 ADORA3P0DMS8 318 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 SERPINF1P36955 418 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 EFNA4P52798 201 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 SNRPD2P62316 118 aaKnown RBP16.6■□□□□ 0.25
COL7A1-207ENST00000467985 TUBA1BP68363 451 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 TUBA4AP68366 448 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 MXRA7P84157 204 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 SWI5Q1ZZU3 235 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 RABL3Q5HYI8 236 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 NHLRC1Q6VVB1 395 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 TUBA1AQ71U36 451 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 RBM45Q8IUH3 476 aaKnown RBP16.6■□□□□ 0.25
COL7A1-207ENST00000467985 OR10H5Q8NGA6 315 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 RCN3Q96D15 328 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 POLR2J2Q9GZM3 115 aaKnown RBP16.6■□□□□ 0.25
COL7A1-207ENST00000467985 POLR2J3Q9H1A7 115 aaKnown RBP16.6■□□□□ 0.25
COL7A1-207ENST00000467985 NANSQ9NR45 359 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 CA10Q9NS85 328 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 MED29Q9NX70 200 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 TAGLN3Q9UI15 199 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 SLC7A7Q9UM01 511 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 ALPK2Q86TB3 2170 aa16.6■□□□□ 0.25
COL7A1-207ENST00000467985 VSTM5A8MXK1 200 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 INAFM1C9JVW0 142 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 LRRN3E7EW58 273 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 LYPD3O95274 346 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 HIST1H2ABP04908 130 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 CSF3P09919 207 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 CRYBA2P53672 197 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 ZP4Q12836 540 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 KRT72Q14CN4 511 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 ZNF74Q16587 644 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 CARD17Q5XLA6 110 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 WDR88Q6ZMY6 472 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 HIST3H2AQ7L7L0 130 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 ZNF627Q7L945 461 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 MAPK1IP1LQ8NDC0 245 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 OR4D11Q8NGI4 311 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 OR6N1Q8NGY5 312 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 HIST1H2ACQ93077 130 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 FBXO17Q96EF6 278 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 ZNF837Q96EG3 531 aaPredicted RBP16.59■□□□□ 0.25
COL7A1-207ENST00000467985 TXNDC15Q96J42 360 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 ZNF426Q9BUY5 554 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 EMC6Q9BV81 110 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 EFCAB1Q9HAE3 211 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 ZNF229Q9UJW7 825 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 POFUT2Q9Y2G5 429 aa16.59■□□□□ 0.25
COL7A1-207ENST00000467985 B9A039 149 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 CH25HO95992 272 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 F12P00748 615 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-207ENST00000467985 THY1P04216 161 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 SLC25A16P16260 332 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 CAPZA2P47755 286 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 NUDT2P50583 147 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 MNAT1P51948 309 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 KRTAP1-1Q07627 177 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 MST1LQ2TV78 715 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 NUP37Q8NFH4 326 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 ZNF583Q96ND8 569 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 ULBP2Q9BZM5 246 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 DENND2DQ9H6A0 471 aaPredicted RBP16.58■□□□□ 0.24
COL7A1-207ENST00000467985 ARL8BQ9NVJ2 186 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 SH3GLB1Q9Y371 365 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 FKBP7Q9Y680 259 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 ABCA1O95477 2261 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 ATRQ13535 2644 aa16.58■□□□□ 0.24
COL7A1-207ENST00000467985 MXRA5Q9NR99 2828 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 CR1P17927 2039 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 IGHV4-30-2A0A087WSY4 118 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 C11orf98E9PRG8 122 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 TLX2O43763 284 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-207ENST00000467985 ENTPD5O75356 428 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 SERPINI2O75830 405 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 IFNGR1P15260 489 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 CSNK1A1P48729 337 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 IDH3GP51553 393 aaPredicted RBP16.57■□□□□ 0.24
COL7A1-207ENST00000467985 CAMK2DQ13557 499 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 EFNB3Q15768 340 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 PHYHD1Q5SRE7 291 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 ZNF813Q6ZN06 617 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 CARM1Q86X55 608 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 OR6X1Q8NH79 312 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 NANOS1Q8WY41 292 aaKnown RBP16.57■□□□□ 0.24
COL7A1-207ENST00000467985 FAM168AQ92567 244 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 NSL1Q96IY1 281 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 ZNF442Q9H7R0 627 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 AP3M1Q9Y2T2 418 aa16.57■□□□□ 0.24
COL7A1-207ENST00000467985 ARFGEF3Q5TH69 2177 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 KPNA4O00629 521 aaPredicted RBP16.56■□□□□ 0.24
COL7A1-207ENST00000467985 RNF13O43567 381 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 CD5LO43866 347 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 OR4A8P0C604 315 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 CALCRP30988 508 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 RBM34P42696 430 aaKnown RBP16.56■□□□□ 0.24
COL7A1-207ENST00000467985 BIDP55957 195 aa16.56■□□□□ 0.24
COL7A1-207ENST00000467985 GABPB1Q06547 395 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms