RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TIMP4Q99727 224 aa10.84□□□□□ -0.67
VPS16-206ENST00000466415 SF3B5Q9BWJ5 86 aaKnown RBP10.84□□□□□ -0.67
VPS16-206ENST00000466415 RPRD1BQ9NQG5 326 aaKnown RBP10.84□□□□□ -0.67
VPS16-206ENST00000466415 MED29Q9NX70 200 aa10.84□□□□□ -0.67
VPS16-206ENST00000466415 B3GAT1Q9P2W7 334 aa10.84□□□□□ -0.67
VPS16-206ENST00000466415 TNFRSF10DQ9UBN6 386 aa10.84□□□□□ -0.67
VPS16-206ENST00000466415 WARS2Q9UGM6 360 aaKnown RBP10.84□□□□□ -0.67
VPS16-206ENST00000466415 SPTBN2O15020 2390 aa10.84□□□□□ -0.67
VPS16-206ENST00000466415 PIEZO1Q92508 2521 aa10.84□□□□□ -0.67
VPS16-206ENST00000466415 LOC102725191A0A1B0GVB3 256 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 A0A1B0GVC2 190 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 PRSS37A4D1T9 235 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 OR6C68A6NDL8 312 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 TRAF3IP2O43734 574 aaPredicted RBP10.83□□□□□ -0.68
VPS16-206ENST00000466415 MRPS14O60783 128 aaKnown RBP10.83□□□□□ -0.68
VPS16-206ENST00000466415 RAMP1O60894 148 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 IGHG1P01857 330 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 GYPBP06028 91 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 SMIM18P0DKX4 95 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 PIPP12273 146 aaPredicted RBP10.83□□□□□ -0.68
VPS16-206ENST00000466415 NR2C1P13056 603 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 CPN1P15169 458 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 SPI1P17947 270 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 CDKN2AP42771 156 aaKnown RBP10.83□□□□□ -0.68
VPS16-206ENST00000466415 SLC25A1P53007 311 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 CLDN17P56750 224 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 SLC35A2P78381 396 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 H3F3AP84243 136 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 RASGEF1BQ0VAM2 473 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 PON3Q15166 354 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 KLHL22Q53GT1 634 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 SLC35D3Q5M8T2 416 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 GTF2IRD2BQ6EKJ0 949 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 ABLIM2Q6H8Q1 611 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 P4HA3Q7Z4N8 544 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 GTF2IRD2Q86UP8 949 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 SIAH3Q8IW03 269 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 MCEMP1Q8IX19 187 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 TEX19Q8NA77 164 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 NPEPL1Q8NDH3 523 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 NOXO1Q8NFA2 376 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 OR6K6Q8NGW6 343 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 ZPLD1Q8TCW7 415 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 GGHQ92820 318 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 WDYHV1Q96HA8 205 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 CRELD1Q96HD1 420 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 RHNO1Q9BSD3 238 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 ALG12Q9BV10 488 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 SYT4Q9H2B2 425 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 RERGLQ9H628 205 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 ERVK-18Q9QC07 812 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 MPDZO75970 2070 aa10.83□□□□□ -0.68
VPS16-206ENST00000466415 CYTIPO60759 359 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 TRMUO75648 421 aaKnown RBP10.82□□□□□ -0.68
VPS16-206ENST00000466415 RAB36O95755 333 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 CLPTM1O96005 669 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 MT-ND2P03891 347 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 CDK1P06493 297 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 CLUP10909 449 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 FCGR2AP12318 317 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 MYL12AP19105 171 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 CENPAP49450 140 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 TUBA4AP68366 448 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 PIGFQ07326 219 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 ST3GAL4Q11206 333 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 RAB40BQ12829 278 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 POU4F2Q12837 409 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 SLC17A1Q14916 467 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 ZNF362Q5T0B9 420 aaPredicted RBP10.82□□□□□ -0.68
VPS16-206ENST00000466415 CARD17Q5XLA6 110 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 CREB3L2Q70SY1 520 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 PRSS48Q7RTY5 328 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 OR51G2Q8NGK0 314 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 TMEM80Q96HE8 168 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 TXNDC15Q96J42 360 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 GPR137Q96N19 417 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 EMC6Q9BV81 110 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 HCAR1Q9BXC0 346 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 PRDM14Q9GZV8 571 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 DUSP21Q9H596 190 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 PRORYQ9H606 182 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 PAK1IP1Q9NWT1 392 aaPredicted RBP10.82□□□□□ -0.68
VPS16-206ENST00000466415 ASB6Q9NWX5 421 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 CHCHD3Q9NX63 227 aaKnown RBP10.82□□□□□ -0.68
VPS16-206ENST00000466415 VSX1Q9NZR4 365 aaPredicted RBP10.82□□□□□ -0.68
VPS16-206ENST00000466415 EMC3Q9P0I2 261 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 KLHL9Q9P2J3 617 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 MOKQ9UQ07 419 aa10.82□□□□□ -0.68
VPS16-206ENST00000466415 APC2O95996 2303 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 A0A1B0GTH9 108 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 SLC22A23A1A5C7 686 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 SLC35F4A4IF30 521 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 OR14I1A6ND48 311 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 CCDC182A6NF36 153 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 TRIM64A6NGJ6 449 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 SLC22A20A6NK97 555 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 AHCYL1O43865 530 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 GLCEO94923 617 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 APOL3O95236 402 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 FADS2O95864 444 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms