RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ZNF771Q7L3S4 317 aaPredicted RBP4.88□□□□□ -1.63
NCL-208ENST00000466274 AAED1Q7RTV5 226 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 CNGA4Q8IV77 575 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 VSTM4Q8IW00 320 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 CCDC170Q8IYT3 715 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 OR2L13Q8N349 312 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 GPR119Q8TDV5 335 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 UBTD2Q8WUN7 234 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 MAIP1Q8WWC4 291 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 TMEM234Q8WY98 164 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 CCL17Q92583 94 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 BCL2L2Q92843 193 aaPredicted RBP4.88□□□□□ -1.63
NCL-208ENST00000466274 EXT2Q93063 718 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 TMEM45BQ96B21 275 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 CERS2Q96G23 380 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 AURKBQ96GD4 344 aaPredicted RBP4.88□□□□□ -1.63
NCL-208ENST00000466274 SAP30LQ9HAJ7 183 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 SLC35C2Q9NQQ7 365 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 SLCO1C1Q9NYB5 712 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 ZMAT5Q9UDW3 170 aaKnown RBP4.88□□□□□ -1.63
NCL-208ENST00000466274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.88□□□□□ -1.63
NCL-208ENST00000466274 HDGFL3Q9Y3E1 203 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 DSPPQ9NZW4 1301 aa4.88□□□□□ -1.63
NCL-208ENST00000466274 EXPH5Q8NEV8 1989 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 ARFGEF3Q5TH69 2177 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 GXYLT2A0PJZ3 443 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 SYCE1LA8MT33 242 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 SUPT3HB4E1H0 165 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 H0YL77 283 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 TRAPPC2LH3BP13 241 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 UPK1AO00322 258 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 NR5A2O00482 541 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 ANKRD28O15084 1053 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 SUPT3HO75486 399 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 SKAP2O75563 359 aaPredicted RBP4.87□□□□□ -1.63
NCL-208ENST00000466274 TGDSO95455 350 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 DUS4LO95620 317 aaKnown RBP4.87□□□□□ -1.63
NCL-208ENST00000466274 LGI1O95970 557 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 IGKV1D-16P01601 117 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 ATP6V1C1P21283 382 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 NTSP30990 170 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 STX2P32856 288 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 TGFBR2P37173 567 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 MTNR1BP49286 362 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 CLK1P49759 484 aaKnown RBP4.87□□□□□ -1.63
NCL-208ENST00000466274 NCBP2P52298 156 aaKnown RBP eCLIP4.87□□□□□ -1.63
NCL-208ENST00000466274 TAS2R39P59534 338 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 ZNF117Q03924 483 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 PDE7AQ13946 482 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 QPRTQ15274 297 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 OR4D1Q15615 310 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 CD300EQ496F6 205 aaPredicted RBP4.87□□□□□ -1.63
NCL-208ENST00000466274 TMEM107Q6UX40 140 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 LHFPL2Q6ZUX7 228 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 RNF144BQ7Z419 303 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 AMIGO2Q86SJ2 522 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 TMCO5AQ8N6Q1 288 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 CDRT4Q8N9R6 151 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 L3MBTL4Q8NA19 623 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 OR5W2Q8NH69 310 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 ADAMTS15Q8TE58 950 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 PIK3R3Q92569 461 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 RAB24Q969Q5 203 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 ATP6V1E2Q96A05 226 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 R3HDM4Q96D70 268 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 THOC1Q96FV9 657 aaKnown RBP4.87□□□□□ -1.63
NCL-208ENST00000466274 AMDHD1Q96NU7 426 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 FRG2BQ96QU4 278 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 GPR61Q9BZJ8 451 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 NMUR2Q9GZQ4 415 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 EGLN1Q9GZT9 426 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 C11orf54Q9H0W9 315 aaPredicted RBP4.87□□□□□ -1.63
NCL-208ENST00000466274 ELOVL6Q9H5J4 265 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 NANOGQ9H9S0 305 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 GRHL1Q9NZI5 618 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 TAAR3PQ9P1P4 343 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 SLC12A4Q9UP95 1085 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 TRAPPC4Q9Y296 219 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 CARD8Q9Y2G2 431 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 FLVCR1Q9Y5Y0 555 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 SOX21Q9Y651 276 aaPredicted RBP4.87□□□□□ -1.63
NCL-208ENST00000466274 COL7A1Q02388 2944 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 HERC2O95714 4834 aa4.87□□□□□ -1.63
NCL-208ENST00000466274 RYR1P21817 5038 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 WI2-2373I1.2A0A1W2PRP0 233 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 A8MXK9 166 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 MYO1GB0I1T2 1018 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 EIF4E2O60573 245 aaKnown RBP4.86□□□□□ -1.63
NCL-208ENST00000466274 JTBO76095 146 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 PSMG1O95456 288 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 H6PDO95479 791 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 CHRM2P08172 466 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 IFI6P09912 130 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 SBK2P0C263 348 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 CTAGE8P0CG41 777 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 PRPS2P11908 318 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 CD1DP15813 335 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 TSPAN8P19075 237 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 GABRA5P31644 462 aa4.86□□□□□ -1.63
NCL-208ENST00000466274 CD80P33681 288 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms