RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SPAG16Q8N0X2 631 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 STEAP2Q8NFT2 490 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 STK35Q8TDR2 534 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 ZNF296Q8WUU4 475 aaPredicted RBP17.99■□□□□ 0.47
SDF4-205ENST00000465727 PTCHD1Q96NR3 888 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 SPHK1Q9NYA1 384 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 MUC22E2RYF6 1773 aaPredicted RBP17.99■□□□□ 0.47
SDF4-205ENST00000465727 SCN3AQ9NY46 2000 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 PRSS44E7EML9 344 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 SULT1C2O00338 296 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 CDC40O60508 579 aaKnown RBP eCLIP17.99■□□□□ 0.47
SDF4-205ENST00000465727 CD3DP04234 171 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 PVALBP20472 110 aaPredicted RBP17.99■□□□□ 0.47
SDF4-205ENST00000465727 ACAA2P42765 397 aaKnown RBP17.99■□□□□ 0.47
SDF4-205ENST00000465727 TAS2R19P59542 299 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 LINC01590Q5TEZ4 76 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 LIN54Q6MZP7 749 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 ENPP7Q6UWV6 458 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 PUSL1Q8N0Z8 303 aaKnown RBP17.99■□□□□ 0.47
SDF4-205ENST00000465727 NXPE3Q969Y0 559 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 ALG12Q9BV10 488 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 FAM117AQ9C073 453 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 CHST6Q9GZX3 395 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 FRRS1LQ9P0K9 344 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 DAPP1Q9UN19 280 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 PRR32B1ATL7 298 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 PSMD9O00233 223 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 B3GALT2O43825 422 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 KCNJ13O60928 360 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 SOX2P48431 317 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 VWA2Q5GFL6 755 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 LIPNQ5VXI9 398 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 ACOT7LQ6ZUV0 252 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 C12orf40Q86WS4 652 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 OR1M1Q8NGA1 313 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 Q96M85 177 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 GPX7Q96SL4 187 aaPredicted RBP17.98■□□□□ 0.47
SDF4-205ENST00000465727 VRK1Q99986 396 aaPredicted RBP17.98■□□□□ 0.47
SDF4-205ENST00000465727 COMMD4Q9H0A8 199 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 WDR13Q9H1Z4 485 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 FKRPQ9H9S5 495 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 DNAJB12Q9NXW2 375 aaKnown RBP17.98■□□□□ 0.47
SDF4-205ENST00000465727 SLC22A7Q9Y694 548 aa17.98■□□□□ 0.47
SDF4-205ENST00000465727 NUDT19A8MXV4 375 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 PRRT4C9JH25 899 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 ADAM11O75078 769 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 RPP14O95059 124 aaKnown RBP17.97■□□□□ 0.47
SDF4-205ENST00000465727 WNT11O96014 354 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 MAS1P04201 325 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 GUSBP08236 651 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 RFC3P40938 356 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 PRMT2P55345 433 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 DCDP81605 110 aaKnown RBP17.97■□□□□ 0.47
SDF4-205ENST00000465727 NKAIN2Q5VXU1 208 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 DHRS7BQ6IAN0 325 aaPredicted RBP17.97■□□□□ 0.47
SDF4-205ENST00000465727 CNKSR3Q6P9H4 555 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 GABRG1Q8N1C3 465 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 GPX8Q8TED1 209 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 ZNF471Q9BX82 626 aaPredicted RBP17.97■□□□□ 0.47
SDF4-205ENST00000465727 SFXN1Q9H9B4 322 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 PCDHB10Q9UN67 800 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 ZNF337Q9Y3M9 751 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 TRAV18A0A075B6X5 111 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 A0A1B0GVT2 93 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 IGLON5A6NGN9 336 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 TMEM200CA6NKL6 621 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 TMEM212A6NML5 194 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 GPR31O00270 319 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 ADH1CP00326 375 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 OR8G3PP0DMU2 310 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 SMIM10L1P0DMW3 83 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 ZNF10P21506 573 aaPredicted RBP17.97■□□□□ 0.47
SDF4-205ENST00000465727 GABRA3P34903 492 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 ARHGDIBP52566 201 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 SLC25A1P53007 311 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 PRPS1P60891 318 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 UBE2IP63279 158 aaKnown RBP17.97■□□□□ 0.47
SDF4-205ENST00000465727 PLA2G7Q13093 441 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 ZNF550Q7Z398 422 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 LDLRAD3Q86YD5 345 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 TMEM229BQ8NBD8 167 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 GPR148Q8TDV2 347 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 SMIM10Q96HG1 83 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 WSB2Q9NYS7 404 aaPredicted RBP17.97■□□□□ 0.47
SDF4-205ENST00000465727 MRM2Q9UI43 246 aaKnown RBP17.97■□□□□ 0.47
SDF4-205ENST00000465727 KCNK6Q9Y257 313 aa17.97■□□□□ 0.47
SDF4-205ENST00000465727 TRPM6Q9BX84 2022 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 TRAV8-7A0A075B6U6 113 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 ABHD14A-ACY1A0A1B0GW23 586 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 URADA6NGE7 173 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 OR52A4PA6NMU1 304 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 HSPB2A8KAH6 182 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 PQBP1O60828 265 aaKnown RBP17.96■□□□□ 0.47
SDF4-205ENST00000465727 DNAJB6O75190 326 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 ABHD16AO95870 558 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 RHOP08100 348 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 GRPRP30550 384 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 GUCA2AQ02747 115 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 HSPB2Q16082 182 aa17.96■□□□□ 0.47
SDF4-205ENST00000465727 ZNF528Q3MIS6 628 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms