RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 ZNF226Q9NYT6 803 aa17.87■□□□□ 0.45
PTCD3-206ENST00000465560 SAMHD1Q9Y3Z3 626 aaKnown RBP17.87■□□□□ 0.45
PTCD3-206ENST00000465560 RPL36A-HNRNPH2H7BZ11 118 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 FKBP6O75344 327 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 RAD51DO75771 328 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 CST1P01037 141 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 SSTR2P30874 369 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 TGFBR3Q03167 851 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 GK3PQ14409 553 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 DAZAP2Q15038 168 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-206ENST00000465560 CARD17Q5XLA6 110 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 C1orf94Q6P1W5 598 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 HDDC2Q7Z4H3 204 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 GPR137CQ8N3F9 429 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 C1orf162Q8NEQ5 155 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-206ENST00000465560 ASB10Q8WXI3 467 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 GPA33Q99795 319 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 MCCC2Q9HCC0 563 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 SIGLEC7Q9Y286 467 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 ABCA4P78363 2273 aa17.86■□□□□ 0.45
PTCD3-206ENST00000465560 CIB4A0PJX0 185 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 MCIDASD6RGH6 385 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 PTP4A3O75365 173 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 IGHMP01871 453 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 THBDP07204 575 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 PRF1P14222 555 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 FPR3P25089 353 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 ROR2Q01974 943 aaKnown RBP17.85■□□□□ 0.45
PTCD3-206ENST00000465560 PPP1R8Q12972 351 aaKnown RBP17.85■□□□□ 0.45
PTCD3-206ENST00000465560 CCNIQ14094 377 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 TAF11Q15544 211 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 GABRA6Q16445 453 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 ACKR1Q16570 336 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 PHYHD1Q5SRE7 291 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 C9orf135Q5VTT2 229 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 OR7E24Q6IFN5 339 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 HMBOX1Q6NT76 420 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 PGBD2Q6P3X8 592 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 YTHDF3Q7Z739 585 aaKnown RBP17.85■□□□□ 0.45
PTCD3-206ENST00000465560 ZNF566Q969W8 418 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 SLC25A44Q96H78 314 aaPredicted RBP17.85■□□□□ 0.45
PTCD3-206ENST00000465560 ZC3HAV1LQ96H79 300 aaKnown RBP17.85■□□□□ 0.45
PTCD3-206ENST00000465560 MUS81Q96NY9 551 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 NDEL1Q9GZM8 345 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 TXNIPQ9H3M7 391 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 GPR35Q9HC97 309 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 U3KQV3 271 aa17.85■□□□□ 0.45
PTCD3-206ENST00000465560 UNC119BA6NIH7 251 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 OR5H1A6NKK0 313 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 A6NNC1 897 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 M0R3G1 203 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 CASKO14936 926 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 CCNB2O95067 398 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 GOSR1O95249 250 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 ZNF26P17031 533 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-206ENST00000465560 CRYGSP22914 178 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 GSSP48637 474 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 CSNK1A1P48729 337 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 CTXN1P60606 82 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 TLE4Q04727 773 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 TAB1Q15750 504 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 STK11Q15831 433 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 TIMM23BQ5SRD1 257 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 ARMC4Q5T2S8 1044 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 ZNF770Q6IQ21 691 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-206ENST00000465560 IGFN1Q86VF2 1251 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 P2RY8Q86VZ1 359 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 C17orf78Q8N4C9 275 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 OR9Q2Q8NGE9 314 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 OR6N1Q8NGY5 312 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 GNPDA2Q8TDQ7 276 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 HSD17B8Q92506 261 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 TMEM54Q969K7 222 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 B3GAT2Q9NPZ5 323 aa17.84■□□□□ 0.45
PTCD3-206ENST00000465560 STX18Q9P2W9 335 aaKnown RBP17.84■□□□□ 0.45
PTCD3-206ENST00000465560 FBN2P35556 2912 aa17.83■□□□□ 0.45
PTCD3-206ENST00000465560 FAM221AA4D161 298 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 CENPBD1B2RD01 187 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 NDUFB2O95178 105 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 IGHG1P01857 330 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 PGA4P0DJD7 388 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 PGA3P0DJD8 388 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 SH3BGRP55822 239 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-206ENST00000465560 TSPAN31Q12999 210 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 MICAQ29983 383 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 SSX8Q7RTT4 187 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 DUS3LQ96G46 650 aaKnown RBP17.83■□□□□ 0.44
PTCD3-206ENST00000465560 BOD1Q96IK1 185 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 GPX7Q96SL4 187 aaPredicted RBP17.83■□□□□ 0.44
PTCD3-206ENST00000465560 POLDIP3Q9BY77 421 aaKnown RBP17.83■□□□□ 0.44
PTCD3-206ENST00000465560 ULBP2Q9BZM5 246 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 CRLF2Q9HC73 371 aa17.83■□□□□ 0.44
PTCD3-206ENST00000465560 ABCA12Q86UK0 2595 aa17.82■□□□□ 0.44
PTCD3-206ENST00000465560 GNGT2O14610 69 aa17.82■□□□□ 0.44
PTCD3-206ENST00000465560 TRMUO75648 421 aaKnown RBP17.82■□□□□ 0.44
PTCD3-206ENST00000465560 CD14P08571 375 aa17.82■□□□□ 0.44
PTCD3-206ENST00000465560 ACADSP16219 412 aa17.82■□□□□ 0.44
PTCD3-206ENST00000465560 RPL4P36578 427 aaKnown RBP17.82■□□□□ 0.44
PTCD3-206ENST00000465560 FXYD6P3P58550 94 aa17.82■□□□□ 0.44
PTCD3-206ENST00000465560 RPL27P61353 136 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms