RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 PXKQ7Z7A4 578 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 LIPHQ8WWY8 451 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 DHRS1Q96LJ7 313 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 ACTR6Q9GZN1 396 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 KRCC1Q9NPI7 259 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-205ENST00000465238 B3GAT1Q9P2W7 334 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 TMCC3Q9ULS5 477 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 CSPG4Q6UVK1 2322 aa15.61■□□□□ 0.09
COL7A1-205ENST00000465238 USF3Q68DE3 2245 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 TRBV4-1A0A0J9YWV2 114 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 EFCAB9A8MZ26 197 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 C11orf98E9PRG8 122 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 RNF13O43567 381 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 TMCC2O75069 709 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 CIB2O75838 187 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 KRT36O76013 467 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 CNOT4O95628 575 aaKnown RBP15.6■□□□□ 0.09
COL7A1-205ENST00000465238 LY6G6DO95868 133 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 ADAP00813 363 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 IGHV3-9P01782 118 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 SAGP10523 405 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-205ENST00000465238 EDNRAP25101 427 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 MAGEA2P43356 314 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 POU3F1Q03052 451 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-205ENST00000465238 P2RY6Q15077 328 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 FBXW9Q5XUX1 488 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 NIPAL3Q6P499 406 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 Q6ZT83 130 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 ASRGL1Q7L266 308 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 WFDC8Q8IUA0 241 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 ADGRG5Q8IZF4 528 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 STEAP2Q8NFT2 490 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 TMEM171Q8WVE6 324 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 CANT1Q8WVQ1 401 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 IGFBPL1Q8WX77 278 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 HDHD5Q9BXW7 423 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 TAS2R5Q9NYW4 299 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 UPB1Q9UBR1 384 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 TMEM5Q9Y2B1 443 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 HIVEP2P31629 2446 aa15.6■□□□□ 0.09
COL7A1-205ENST00000465238 OR6C65A6NJZ3 312 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 SERPINI2O75830 405 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 KRT33AO76009 404 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 PAX1P15863 534 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 MAKP20794 623 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 PTH2RP49190 550 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 C1orf146Q5VVC0 180 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 GABRG1Q8N1C3 465 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 CIARTQ8N365 385 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-205ENST00000465238 ANKK1Q8NFD2 765 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 OR4K5Q8NGD3 323 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 PLPPR2Q96GM1 343 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 TMEM204Q9BSN7 226 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 CHID1Q9BWS9 393 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 ASB6Q9NWX5 421 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 RCE1Q9Y256 329 aa15.59■□□□□ 0.09
COL7A1-205ENST00000465238 TCRBV3S1A0A5B6 114 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 SH3PXD2BA1X283 911 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 ZNF726A6NNF4 738 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 TNFRSF11BO00300 401 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 TRAF3IP2O43734 574 aaPredicted RBP15.58■□□□□ 0.08
COL7A1-205ENST00000465238 SLC43A1O75387 559 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 HLA-DOBP13765 273 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 AQP2P41181 271 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 GPR4P46093 362 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 SLC9A3P48764 834 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 SELENOPP49908 381 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 RPL18Q07020 188 aaKnown RBP15.58■□□□□ 0.08
COL7A1-205ENST00000465238 FAPQ12884 760 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 ITGADQ13349 1161 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 SEC23BQ15437 767 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 TSPO2Q5TGU0 170 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 OR2T5Q6IEZ7 315 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 TMPRSS11FQ6ZWK6 438 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 OAFQ86UD1 273 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 MEX3DQ86XN8 651 aaKnown RBP15.58■□□□□ 0.08
COL7A1-205ENST00000465238 ZNF611Q8N823 705 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 POMGNT2Q8NAT1 580 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 OR2T29Q8NH02 315 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 FAM46AQ96IP4 442 aaKnown RBP15.58■□□□□ 0.08
COL7A1-205ENST00000465238 RSRC1Q96IZ7 334 aaKnown RBP15.58■□□□□ 0.08
COL7A1-205ENST00000465238 SLCO5A1Q9H2Y9 848 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 CXorf56Q9H5V9 222 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 YY1AP1Q9H869 796 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 SLC7A10Q9NS82 523 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 ALPK2Q86TB3 2170 aa15.58■□□□□ 0.08
COL7A1-205ENST00000465238 TRIM64A6NGJ6 449 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 TRIM64BA6NI03 449 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 HS3ST1O14792 307 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 OR10H3O60404 316 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 PLAUP00749 431 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 IL32P24001 234 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 IFNGR2P38484 337 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 ERFP50548 548 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 LAPTM4AQ15012 233 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 ANKDD1AQ495B1 522 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 SFRP5Q5T4F7 317 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 SLC35D2Q76EJ3 337 aa15.57■□□□□ 0.08
COL7A1-205ENST00000465238 ABHD12BQ7Z5M8 362 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-205ENST00000465238 OR51A7Q8NH64 312 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms