RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 NPAP1Q9NZP6 1156 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 CD207Q9UJ71 328 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 C19orf53Q9UNZ5 99 aaPredicted RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 P2RY10O00398 339 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 NUDT21O43809 227 aaKnown RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 FADS1O60427 444 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZNF780AO75290 641 aaPredicted RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 SOD1P00441 154 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 RAD52P43351 418 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 RAB38P57729 211 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 SLC26A5P58743 744 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 TNK1Q13470 666 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 C12orf73Q69YU5 71 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 THSD4Q6ZMP0 1018 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 C19orf47Q8N9M1 422 aaKnown RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 RELL2Q8NC24 303 aaPredicted RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 OR51T1Q8NGJ9 327 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 OR52B4Q8NGK2 314 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 OR4C15Q8NGM1 316 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZFAND1Q8TCF1 268 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 TRMT61AQ96FX7 289 aaKnown RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 MRGPRX3Q96LB0 322 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 MYADMQ96S97 322 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZNF587Q96SQ5 575 aaPredicted RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 BARHL1Q9BZE3 327 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 SLC5A7Q9GZV3 580 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 BCL2L10Q9HD36 194 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 APMAPQ9HDC9 416 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 SLC22A13Q9Y226 551 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 NPFFR2Q9Y5X5 522 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 A0A1B0GTH9 108 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 CIB4A0PJX0 185 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 B8ZZF3 427 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 RAB40ALP0C0E4 278 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 GABRR1P24046 479 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 CDK2P24941 298 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 CTHP32929 405 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 ETV6P41212 452 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 ALKBH1Q13686 389 aaKnown RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 RBMS2Q15434 407 aaKnown RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 USF2Q15853 346 aaPredicted RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 KIRREL2Q6UWL6 708 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 CREB3L2Q70SY1 520 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 PLXDC1Q8IUK5 500 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 PLPP6Q8IY26 295 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 RCBTB1Q8NDN9 531 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 C17orf47Q8NEP4 570 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 RAB40AQ8WXH6 277 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 DCLRE1CQ96SD1 692 aaKnown RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 ATF6BQ99941 703 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 PRDM7Q9NQW5 492 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 DUSP22Q9NRW4 184 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 PLEK2Q9NYT0 353 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 KCNIP3Q9Y2W7 256 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 MEGF11A6BM72 1044 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 RGS11O94810 467 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 CXCL10P02778 98 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 SLC35E2P0CK97 266 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 CD6P30203 668 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 GZMMP51124 257 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 CCR9P51686 369 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 TCEAL6Q6IPX3 200 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 LAIR2Q6ISS4 152 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 STEAP1BQ6NZ63 245 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 ARSKQ6UWY0 536 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 SSX6Q7RTT6 188 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 ANKRD33Q7Z3H0 272 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 LIX1LQ8IVB5 337 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 UEVLDQ8IX04 471 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 BATF2Q8N1L9 274 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 ZNF680Q8NEM1 530 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 KIAA1143Q96AT1 154 aaPredicted RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 NECAB3Q96P71 396 aaPredicted RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 GPA33Q99795 319 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 WASH6PQ9NQA3 447 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 A0A0B4J2A0 478 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 HCRTR1O43613 425 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 OR2T1O43869 369 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 UTS2O95399 124 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 OLFM2O95897 454 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 TP53P04637 393 aaPredicted RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 GAAP10253 952 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 SPI1P17947 270 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 SERPINA2P20848 420 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 CRABP1P29762 137 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 EMDP50402 254 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 TPMTP51580 245 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 PCBP3P57721 371 aaKnown RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 RAB2AP61019 212 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 MC2RQ01718 297 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 SRYQ05066 204 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 VWA2Q5GFL6 755 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 GOT1L1Q8NHS2 421 aaPredicted RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 FAM3DQ96BQ1 224 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 GSX2Q9BZM3 304 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 OR51B6Q9H340 312 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 B3GAT2Q9NPZ5 323 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 SIRT3Q9NTG7 399 aaPredicted RBP8.33□□□□□ -1.08
HPS4-208ENST00000464362 CUTCQ9NTM9 273 aa8.33□□□□□ -1.08
HPS4-208ENST00000464362 SHPKQ9UHJ6 478 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms