RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 C10orf111Q8N326 155 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 CLDND2Q8NHS1 167 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 MOGAT1Q96PD6 335 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 OCEL1Q9H607 264 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 B3GAT2Q9NPZ5 323 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 MYEF2Q9P2K5 600 aaKnown RBP19.43■□□□□ 0.7
USP4-208ENST00000464168 NOX1Q9Y5S8 564 aa19.43■□□□□ 0.7
USP4-208ENST00000464168 MGAM2Q2M2H8 2515 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 FAM157AC9JC47 383 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 WNT9BO14905 357 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 ARAFP10398 606 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 GPR6P46095 362 aaPredicted RBP19.42■□□□□ 0.7
USP4-208ENST00000464168 GIPRP48546 466 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 PTDSS1P48651 473 aaKnown RBP19.42■□□□□ 0.7
USP4-208ENST00000464168 RAB1AP62820 205 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 PMS2P3Q13401 168 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 CAMK2DQ13557 499 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 MAD2L1BPQ15013 274 aaPredicted RBP19.42■□□□□ 0.7
USP4-208ENST00000464168 REEP3Q6NUK4 255 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 MSRB3Q8IXL7 192 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 RNF217Q8TC41 542 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 RDH5Q92781 318 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 EPYCQ99645 322 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 ASPNQ9BXN1 380 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 ULBP2Q9BZM5 246 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 DENND2DQ9H6A0 471 aaPredicted RBP19.42■□□□□ 0.7
USP4-208ENST00000464168 NARFLQ9H6Q4 476 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 METTL17Q9H7H0 456 aaPredicted RBP19.42■□□□□ 0.7
USP4-208ENST00000464168 HIF1ANQ9NWT6 349 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 MRPL39Q9NYK5 338 aaKnown RBP19.42■□□□□ 0.7
USP4-208ENST00000464168 FZR1Q9UM11 496 aa19.42■□□□□ 0.7
USP4-208ENST00000464168 A0A0A6YYJ9 748 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 LRRN3E7EW58 273 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 PLPP3O14495 311 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 TPST2O60704 377 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 ACHEP22303 614 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 CFPP27918 469 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 CDK6Q00534 326 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 RUNX1T1Q06455 604 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 PUDPQ08623 228 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 OR1Q1Q15612 314 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 GCNT6Q5T4J0 391 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 GKAP1Q5VSY0 366 aaPredicted RBP19.41■□□□□ 0.7
USP4-208ENST00000464168 C12orf54Q6X4T0 127 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 KRT73Q86Y46 540 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 GOLGA6L1Q8N7Z2 621 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 OR6N1Q8NGY5 312 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 YIPF5Q969M3 257 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 TMEM186Q96B77 213 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 FOXB1Q99853 325 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 WFDC6Q9BQY6 131 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 SLAMF8Q9P0V8 285 aa19.41■□□□□ 0.7
USP4-208ENST00000464168 TESQ9UGI8 421 aaKnown RBP19.41■□□□□ 0.7
USP4-208ENST00000464168 A0A0B4J2E0 115 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 A0A1B0GX12 115 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 ZNF726A6NNF4 738 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 SAGP10523 405 aaPredicted RBP19.4■□□□□ 0.7
USP4-208ENST00000464168 TMEM33P57088 247 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 RPS23P62266 143 aaKnown RBP19.4■□□□□ 0.7
USP4-208ENST00000464168 RAB39AQ14964 217 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 LRIF1Q5T3J3 769 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 PXKQ7Z7A4 578 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 CROCCP2Q86T23 111 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 SNX32Q86XE0 403 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 SEMA6DQ8NFY4 1073 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 SPATA5L1Q9BVQ7 753 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 TMEM27Q9HBJ8 222 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 LPAR2Q9HBW0 351 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 ZNF275Q9NSD4 429 aaPredicted RBP19.4■□□□□ 0.7
USP4-208ENST00000464168 TREM2Q9NZC2 230 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 SELENONQ9NZV5 590 aa19.4■□□□□ 0.7
USP4-208ENST00000464168 NCR1O76036 304 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 RAB36O95755 333 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 TFP02787 698 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 MSMBP08118 114 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 PATE4P0C8F1 98 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 SLC18A1P54219 525 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 CDH12P55289 794 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 MRPS11P82912 194 aaKnown RBP19.39■□□□□ 0.69
USP4-208ENST00000464168 GALK2Q01415 458 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 REP15Q6BDI9 236 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 ZNF584Q8IVC4 421 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 FUNDC1Q8IVP5 155 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 SKA3Q8IX90 412 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 FGFBP3Q8TAT2 258 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 ZFAND2BQ8WV99 257 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 TMEM43Q9BTV4 400 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 PLA2G12AQ9BZM1 189 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 DUSP13Q9UII6 198 aa19.39■□□□□ 0.69
USP4-208ENST00000464168 RP2O75695 350 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 UBL3O95164 117 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 SERPINA5P05154 406 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 GAAP10253 952 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 NAT2P11245 290 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 AHCYP23526 432 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 MRPL19P49406 292 aaKnown RBP19.38■□□□□ 0.69
USP4-208ENST00000464168 RGS8P57771 180 aaPredicted RBP19.38■□□□□ 0.69
USP4-208ENST00000464168 NCALDP61601 193 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 LMO4P61968 165 aa19.38■□□□□ 0.69
USP4-208ENST00000464168 EPGNQ6UW88 154 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms