RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 MICU1Q9BPX6 476 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF2Q9BSG1 426 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 PCBD2Q9H0N5 130 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OR2AG1Q9H205 316 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TUBA4BQ9H853 241 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 BRF2Q9HAW0 419 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TMEM27Q9HBJ8 222 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MMP26Q9NRE1 261 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TMEM161AQ9NX61 479 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CALML5Q9NZT1 146 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SHPKQ9UHJ6 478 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF638Q14966 1978 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 COL5A1P20908 1838 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 KIAA1549LQ6ZVL6 1849 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CUL9Q8IWT3 2517 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CCDC187A0A096LP49 1063 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TRBV11-1A0A0K0K1C0 115 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 LOC100289279A0A1B0GTE1 492 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 A0A1W2PPK0 400 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 LNP1A1A4G5 178 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TBC1D3BA6NDS4 549 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 C9J4A7 227 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CLIC1O00299 241 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 GEMIN2O14893 280 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CCL25O15444 150 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MAGEB4O15481 346 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF264O43296 627 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 PLRG1O43660 514 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MPZL2O60487 215 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 DOK2O60496 412 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BKO60814 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 DUSP11O75319 330 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ALOX12BO75342 701 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF432O94892 652 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZFPL1O95159 310 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 IL18BPO95998 194 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TRGC2P03986 189 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SOD2P04179 222 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HLA-DPB1P04440 258 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BJP06899 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 C8GP07360 202 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ANXA5P08758 320 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 C1SP09871 688 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF865P0CJ78 1059 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 LIPCP11150 499 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TDGF1P13385 188 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CEACAM1P13688 526 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TYRP1P17643 537 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 GZMHP20718 246 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BOP23527 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BBP33778 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 IFNGR2P38484 337 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 AQP2P41181 271 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MAPK9P45984 424 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 RFX3P48380 749 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 IDH3GP51553 393 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CEBPGP53567 150 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BDP58876 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BCP62807 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SLC7A9P82251 487 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 KLF9Q13886 244 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HEPACAMQ14CZ8 416 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ARL6IP1Q15041 203 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST2H2BEQ16778 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF791Q3KP31 576 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ATG9BQ674R7 924 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TBC1D3GQ6DHY5 549 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 ABHD15Q6UXT9 468 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 Q6ZSR9 355 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CLEC20AQ6ZU45 233 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 NDUFAF7Q7L592 441 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TMPRSS11BQ86T26 416 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 KMT5CQ86Y97 462 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 AMER3Q8N944 861 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 FAM71CQ8NEG0 241 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OR2AK2Q8NG84 335 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 THEM6Q8WUY1 208 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SORCS1Q8WY21 1168 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BHQ93079 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TMEM143Q96AN5 459 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OTUB2Q96DC9 234 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 TMEM176AQ96HP8 235 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SEC22AQ96IW7 307 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SNX22Q96L94 193 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BNQ99877 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BMQ99879 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 HIST1H2BLQ99880 126 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 FAIM2Q9BWQ8 316 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 RAB33BQ9H082 229 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CSTL1Q9H114 145 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 KRCC1Q9NPI7 259 aaPredicted RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 OR2S2Q9NQN1 319 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 RBM22Q9NW64 420 aaKnown RBP eCLIP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 MRPL22Q9NWU5 206 aaKnown RBP3.3□□□□□ -1.88
COL8A1-205ENST00000463753 SLC23A2Q9UGH3 650 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 CACFD1Q9UGQ2 172 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 IL19Q9UHD0 177 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 AKT3Q9Y243 479 aa3.3□□□□□ -1.88
COL8A1-205ENST00000463753 PPIAL4AQ9Y536 164 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms